doc. RNDr. Jaromír Marek, Ph.D.

Curriculum Vitae

Person-Related Identification Information

• Assoc. Prof. RNDr. Jaromír Marek, Ph.D. (1964), X-ray crystallographer

Employment - Position

• Core Facility Single Crystal Diffraction (Central-European Technology Institute) - head
• Research group X-ray Crystallography (Central-European Technology Institute) - head
• Department of Experimental Biology (Faculty of Science) - independent scientist-researcher

Education and Academic Qualifications

• 2000: Associate Professor, Masaryk University, Brno (Chemistry)
• 1995: Ph.D. (Dr.), Masaryk University, Brno (Chemistry)
• 1987: M.S. (RNDr.) - Jan Evangelista Purkyne University, Brno (Physics)

Employment

• 2011- : Core Facility Single Crystal Diffraction, Centre for Structural Biology, CEITEC MU, Masaryk University, independent scientist-researcher and head of CF
• 2011- : Research group X-ray Crystallography, Centre for Structural Biology, CEITEC MU, Masaryk University, independent scientist-researcher and head of RG
• 2006-2011: Dept of Inorganic Chemistry, Fac Sci, Palacky University Olomouc, scientific researcher
• 2001- : Dept of Functional Genomics and Proteomics, Fac Sci, Masaryk University, independent scientist-researcher
• 2000: Dept of Functional Genomics and Proteomics, Fac Sci, Masaryk University, scientific researcher
• 1996-2000: Laboratory of Biomolecular Structure and Dynamics, Fac Sci, Masaryk University, scientific researcher
• 1991-2000: Dept of Inorganic Chemistry, Fac Sci, Masaryk University, assistant professor
• 1990-1991: Dept of Solid State Physics, Fac Sci, Masaryk University, research worker
• 1987-1990: TESLA Rožnov, research worker

Ph.D. students

• Mgr. Tomáš Klumpler, Ph.D. (2011)
• Mgr. Jitka Vévodová, Ph.D. (2002)
• Doc. Mgr. Ivana Kutá-Smatanová, PhD. (1999)

Scientific and Research Activities

• Scientific interests of J. Marek are focused mainly on the single crystal diffraction. He published more than 150 MS. HI=20.

Internship

• 1992-1993 - 6 months - University of Lund, Sweden - student internship (Tempus)
• 1998-1999 - 4 months - University of Lund, Sweden - scientific exchange between the Czech Republic and Sweden

Activities Outside University

• 2008-2012 - The Ministry of Education, Youth and Sports of the Czech Republic - reviewer of projects of the European Social Fund (ESF) in the CR within the Education for Competitiveness Operational Programme (ECOP) - Priority axis 2 - Tertiary education, research and development

Major Publications

• HUDSON, J J R, Kateřina BEDNÁŘOVÁ, Lucie KOZÁKOVÁ, Chunyan LIAO, Marc GUÉRINEAU, Rita COLNAGHI, Susanne VIDOT, Jaromír MAREK, Sreenivas Reddy BATHULA, Alan LEHMANN a Jan PALEČEK. Interactions between the Nse3 and Nse4 Components of the SMC5-6 Complex Identify Evolutionarily Conserved Interactions between MAGE and EID Families. PloS ONE. San Francisco: Public Library of Science, roč. 6, č. 2, s. "nestránkováno", 14 s. ISSN 1932-6203. doi:10.1371/journal.pone.0017270. 2011. URL info
• TRÁVNÍČEK, Zdeněk, Radka NOVOTNÁ, Jaromír MAREK a Igor POPA. Transformations of the natural cytokinin N6-isopentenyladenine in aqueous acidic media: structural aspects. Organic and Biomolecular Chemistry. Cambridge, UK: Royal Society of Chemistry, roč. 9, č. 16, s. 5703-5713. ISSN 1477-0520. 2011. DOI info
• PEKÁROVÁ, Blanka, Tomáš KLUMPLER, Olga TŘÍSKOVÁ, Jakub HORÁK, Séverine JANSEN, Radka DOPITOVÁ, Petra BORKOVCOVÁ, Veronika PAPOUŠKOVÁ, Eliška NEJEDLÁ, Vladimír SKLENÁŘ, Jaromír MAREK, Lukáš ŽÍDEK, Jan HEJÁTKO a Lubomír JANDA. Structure and binding specificity of the receiver domain of sensor histidine kinase CKI1 from Arabidopsis thaliana. The Plant Journal. England: BLACKWELL PUBLISHING, roč. 67, č. 5, s. 827-839. ISSN 0960-7412. doi:10.1111/j.1365-313X.2011.04637.x. 2011. URL info
• JEŘÁBKOVÁ, Barbora, Jaromír MAREK, H. BUČKOVÁ, Lenka KOPEČKOVÁ, Karel VESELÝ, J. VALÍČKOVÁ, Jiří FAJKUS a Lenka FAJKUSOVÁ. Keratin mutations in patients with epidermolysis bullosa simplex: correlations between phenotype severity and disturbance of intermediate filament molecular structure. The British journal of dermatology : the official organ of the British Association of Dermatology. London: H.K. Lewis & Co., roč. 162, ., s. 1004-1013. ISSN 0007-0963. 2010. info
• DUTTA, D., A.D. JANA, M. DEBNATH, A. BHAUMIK, Jaromír MAREK a Mahammad ALI. Robust 1D open rack-like architecture in coordination polymers of Anderson POMs [{Na-4(H2O)(14)}{Cu(gly)}(2)][TeMo6O24] and [{Cu(en)(2)}(3){TeW6O24}]: synthesis, characterization and heterogeneous catalytic epoxidation of olefines. Dalton transactions : an international journal of inorganic chemistry. Cambridge: The Royal Society of Chemistry, roč. 39, č. 48, s. 11551-11559. ISSN 1477-9226. 2010. URL info
• CHRAPPOVÁ, J., P. SCHWENDT, M. SIVÁK, M. REPISKÝ, V. G. MALKIN a Jaromír MAREK. Dinuclear fluoro-peroxovanadium(V) complexes with symmetric and asymmetric peroxo bridges: syntheses, structures and DFT studies. Dalton transactions : an international journal of inorganic chemistry. Cambridge: The Royal Society of Chemistry, roč. 2009, č. 3, s. 465-473. ISSN 1477-9226. 2009. info
• ALI, M., D. DUTTA, S. BISWAS, Jaromír MAREK a A. D. JANA. The first crystallographic observation of up to the third hydration layer of Cu(II) ion in an unusual 'water-cation layer' templated by an Anderson polyoxometallate. CRYSTENGCOMM. Cambridge, UK: RSC Publishing, roč. 11, č. 12, s. 2608-2610. ISSN 1466-8033. 2009. URL info
• ZOUHAR, Jan, Jitka VÉVODOVÁ, Jaromír MAREK, Jiří DAMBORSKÝ, X.-D. SU a Břetislav BRZOBOHATÝ. Insights into the Functional Architecture of the Catalytic Center of a Maize Beta-Glucosidase Zm-p60.1. Plant Physiology. USA: American Society of Plant Physiologists, roč. 127, č. 3, s. 973-985. ISSN 0032-0889. 2001. info
• MAREK, Jaromír, Jitka VÉVODOVÁ, Ivana KUTÁ-SMATANOVÁ, Y. NAGATA, L.A. SVENSSON, J. NEWMAN, M. TAKAGI a Jiří DAMBORSKÝ. Crystal structure of the haloalkane dehalogenase from Sphingomonas paucimobilis UT26. Biochemistry. Washington, DC, USA: American Chemical Society, roč. 39, č. 46, s. 14082-14086. ISSN 0006-2960. 2000. URL info

2012/06/04