Publication details

<< back
 

BioDiVinE: A Tool for Parallel Analysis of Multi-Affine ODE Models

Basic information
Original title:BioDiVinE: A Tool for Parallel Analysis of Multi-Affine ODE Models
Authors:Jiří Barnat, Luboš Brim, Ivana Černá, Sven Dražan, Jana Fabriková, Jan Láník, David Šafránek
Further information
Citation:BARNAT, Jiří, Luboš BRIM, Ivana ČERNÁ, Sven DRAŽAN, Jana FABRIKOVÁ, Jan LÁNÍK and David ŠAFRÁNEK. BioDiVinE: A Tool for Parallel Analysis of Multi-Affine ODE Models. In Computational Mehotds in Systems Biology: Abstract of the Posters. Pisa: University of Pisa, 2009. p. 1-5, 4 pp.Export BibTeX
@inproceedings{843066,
author = {Barnat, Jiří and Brim, Luboš and Černá, Ivana and Dražan, Sven and Fabriková, Jana and Láník, Jan and Šafránek, David},
address = {Pisa},
booktitle = {Computational Mehotds in Systems Biology: Abstract of the Posters},
keywords = {parallel model checking; ordinary differential equations; multi-affine systems},
language = {eng},
location = {Pisa},
pages = {1-5},
publisher = {University of Pisa},
title = {BioDiVinE: A Tool for Parallel Analysis of Multi-Affine ODE Models},
year = {2009}
}
Original language:English
Field:Informatics
Type:Article in Proceedings
Keywords:parallel model checking; ordinary differential equations; multi-affine systems

This work focuses on analysis of dynamic systems describing functionality of biological networks. In particular, the biological model is considered as a system of multi-affine ODEs. The continuous state space of the dynamic system is abstracted into a finite automaton by employing the rectangular abstraction method. The analysis is performed on abstracted models. In particular, the state space reachable from given initial conditions (initial concentration of species) is automatically generated and analysed.

Related projects:

 
 
top