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Masaryk University

Prof. RNDr. Vladimír Sklenář, DrSc.

Basic CV Supervisor Qualifications Publications Projects Teaching

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found: 168 records, displayed 1 - 100

2013

Origin of the Conformational Modulation of the 13C NMR Chemical Shift of Methoxy Groups in Aromatic Natural Compounds

TOUŠEK, Jaromír - STRAKA, Michal - SKLENÁŘ, Vladimír - MAREK, Radek.
Origin of the Conformational Modulation of the 13C NMR Chemical Shift of Methoxy Groups in Aromatic Natural Compounds. The Journal of Physical Chemistry A, American Chemical Society, USA. ISSN 1089-5639, 2013, vol. 117, no. 3, pp. 661-669.

Toward Reproducing Sequence Trends in Phosphorus Chemical Shifts for Nucleic Acids by MD/DFT Calculations

PŘECECHTĚLOVÁ, Jana - MUNZAROVÁ, Markéta - VAARA, Juha - NOVOTNÝ, Jan - DRAČÍNSKÝ, Martin - SKLENÁŘ, Vladimír.
Toward Reproducing Sequence Trends in Phosphorus Chemical Shifts for Nucleic Acids by MD/DFT Calculations. Journal of Chemical Theory and Computation, WASHINGTON, AMER CHEMICAL SOC, USA. ISSN 1549-9618, 2013, vol. 9, no. 3, pp. 1641-1656.

2012

4D Non-uniformly sampled HCBCACON and (1) J(NC alpha)-selective HCBCANCO experiments for the sequential assignment and chemical shift analysis of intrinsically disordered proteins

NOVÁČEK, Jiří - HABA, Noam Y - CHILL, Jordan H - ŽÍDEK, Lukáš - SKLENÁŘ, Vladimír.
4D Non-uniformly sampled HCBCACON and (1) J(NC alpha)-selective HCBCANCO experiments for the sequential assignment and chemical shift analysis of intrinsically disordered proteins. Journal of Biomolecular NMR, Dordrecht, Springer Netherlands, The Nederlands. ISSN 0925-2738, 2012, vol. 53, no. 2, pp. 139-148.

Accurate Reduced Spectral Density Mapping for Analysis of 13C Relaxation Rates

KADEŘÁVEK, Pavel - ZAPLETAL, Vojtěch - FIALA, Radovan - SKLENÁŘ, Vladimír - ŽÍDEK, Lukáš.
Accurate Reduced Spectral Density Mapping for Analysis of 13C Relaxation Rates. 2012.

Enantioselective effects of alpha-hexachlorocyclohexane (HCH) isomers on androgen receptor activity in vitro.

PAVLÍKOVÁ, Nela - BLÁHOVÁ, Lucie - KLÁN, Petr - BATHULA, R. B. - SKLENÁŘ, Vladimír - GIESY, J. - BLÁHA, Luděk.
Enantioselective effects of alpha-hexachlorocyclohexane (HCH) isomers on androgen receptor activity in vitro. Chemosphere, OXFORD, ENGLAND, PERGAMON-ELSEVIER SCIENCE LTD, Great Britain. ISSN 0045-6535, 2012, vol. 86, no. 1, pp. 65-69.

NMR Studies of the Receiver Domain of the CKI1 Sensory Histidine Kinase from Arabidopsis thaliana

OTRUSINOVÁ, Olga - JANSEN, Séverine - KADEŘÁVEK, Pavel - PEKÁROVÁ, Blanka - MAREK, Jaromír - HEJÁTKO, Jan - JANDA, Lubomír - ŽÍDEK, Lukáš - SKLENÁŘ, Vladimír.
NMR Studies of the Receiver Domain of the CKI1 Sensory Histidine Kinase from Arabidopsis thaliana. 2012.

NMR study of RNA polymerase delta subunit unique for gram-positive bacteria

PAPOUŠKOVÁ, Veronika - NOVÁČEK, Jiří - ŠANDEROVÁ, Hana - RABATINOVÁ, Alžběta - ZAWADZKA-KAZIMIERCZUK, Anna - KAZIMIERCZUK, Krzystof - ŽÍDEK, Lukáš - KOZMINSKI, Wiktor - KRÁSNÝ, Libor - SKLENÁŘ, Vladimír.
NMR study of RNA polymerase delta subunit unique for gram-positive bacteria. 2012. ISBN 978-80-86441-43-6. Valtice.

RNA

ŠTEFL, Richard - SKLENÁŘ, Vladimír.
RNA. In NMR of Biomolecules, Towards Mechanistic System Biology. Vyd. 1. Weinheim, Německo : Wiley-Blackwell, 2012. Neuveden, ISBN 978-3-527-32850-5, pp. 119-135.

Understanding the NMR properties and conformational behavior of indole vs. azaindole group in protoberberines: NICS and NCS analysis

KADAM, Shivaji Sambhaji - TOUŠEK, Jaromír - MAIER, Lukáš - PIPÍŠKA, Matej - SKLENÁŘ, Vladimír - MAREK, Radek.
Understanding the NMR properties and conformational behavior of indole vs. azaindole group in protoberberines: NICS and NCS analysis. Journal of Molecular Structure, Amsterdam, Elsevier, The Nederlands. ISSN 0022-2860, 2012, vol. 1028, no. Nov, pp. 31-38.

2011

5D 13C-detected experiments for backbone assignment of unstructured proteins with a very low signal dispersion

NOVÁČEK, Jiří - ZAWADZKA-KAZIMIERCZUK, Anna - PAPOUŠKOVÁ, Veronika - ŽÍDEK, Lukáš - ŠANDEROVÁ, Hana - KRÁSNÝ, Libor - KOZMINSKI, Wiktor - SKLENÁŘ, Vladimír.
5D 13C-detected experiments for backbone assignment of unstructured proteins with a very low signal dispersion. Journal of Biomolecular NMR, Dordrecht, Springer Netherlands, The Nederlands. ISSN 0925-2738, 2011, vol. 50, no. 1, pp. 1-11.

Complementation of 3D structure of delta subunit of RNA polymerase from Bacillus subtilis with description of internal motions in terms of reduced spectral density mapping

KADEŘÁVEK, Pavel - DIEHL, Carl - PAPOUŠKOVÁ, Veronika - ŠANDEROVÁ, Hana - PADRTA, Petr - ŽÍDEK, Lukáš - KRÁSNÝ, Libor - SKLENÁŘ, Vladimír - AKKE, Mikael.
Complementation of 3D structure of delta subunit of RNA polymerase from Bacillus subtilis with description of internal motions in terms of reduced spectral density mapping. MATERIALS STRUCTURE. ISSN 1211-5894, 2011, vol. 18, no. 1, pp. 3-5.

Effect of Mg2+ Binding on the Receiver Domain of the CKI1 Sensory Histidine Kinase from Arabidopsis thaliana

JANSEN, Séverine - TŘÍSKOVÁ, Olga - PEKÁROVÁ, Blanka - KLUMPLER, Tomáš - HORÁK, Jakub - DOPITOVÁ, Radka - NOVÁČEK, Jiří - MAREK, Jaromír - HEJÁTKO, Jan - JANDA, Lubomír - ŽÍDEK, Lukáš - SKLENÁŘ, Vladimír.
Effect of Mg2+ Binding on the Receiver Domain of the CKI1 Sensory Histidine Kinase from Arabidopsis thaliana. Frankfurt am Main, Germany : EUROMAR, 2011. ISBN 978-3-86955-845-5, p. 325-325. 21.8.2011, Frankfurt am Main, Germany.

FIALA, Radovan - ŠPAČKOVÁ, Naděžda - FOLDYNOVÁ-TRANTÍRKOVÁ, Silvie - ŠPONER, Jiří - SKLENÁŘ, Vladimír - TRANTÍREK, Lukáš.
NMR cross-correlated relaxation rates reveal ion coordination sites in DNA. Journal of the American Chemical Society, Washington, DC., USA, American Chemical Society, USA. ISSN 0002-7863, 2011, vol. 133, no. 35, pp. 13790-13793.

NMR study of an RNA polymerase subunit unique for gram-positive bacteria

PAPOUŠKOVÁ, Veronika - KADEŘÁVEK, Pavel - NOVÁČEK, Jiří - ŽÍDEK, Lukáš - SKLENÁŘ, Vladimír.
NMR study of an RNA polymerase subunit unique for gram-positive bacteria. 2011.

Structure and binding specificity of the receiver domain of sensor histidine kinase CKI1 from Arabidopsis thaliana.

PEKÁROVÁ, Blanka - KLUMPLER, Tomáš - TŘÍSKOVÁ, Olga - HORÁK, Jakub - JANSEN, Séverine - DOPITOVÁ, Radka - BORKOVCOVÁ, Petra - PAPOUŠKOVÁ, Veronika - NEJEDLÁ, Eliška - SKLENÁŘ, Vladimír - MAREK, Jaromír - ŽÍDEK, Lukáš - HEJÁTKO, Jan - JANDA, Lubomír.
Structure and binding specificity of the receiver domain of sensor histidine kinase CKI1 from Arabidopsis thaliana. The Plant Journal, England, BLACKWELL PUBLISHING, Great Britain. ISSN 0960-7412, 2011, vol. 67, no. 5, pp. 827-839.

Study of RNA polymerase delta subunit unique for gram-positive bacteria

PAPOUŠKOVÁ, Veronika - KADEŘÁVEK, Pavel - NOVÁČEK, Jiří - PADRTA, Petr - HANA, Šanderová - ALŽBĚTA, Rabatinová - ANNA, Zawadzka-Kazimierczuk - KRZYSZTOF, Kazimierczuk - ŽÍDEK, Lukáš - WIKTOR, Kozminski - LIBOR, Krásný - SKLENÁŘ, Vladimír.
Study of RNA polymerase delta subunit unique for gram-positive bacteria. 2011.

2010

ANALYSIS OF BACKBONE MOTIONS OF DELTA SUBUNIT OF RNA POLYMERASE FROM BACILLUS SUBTILIS

KADEŘÁVEK, Pavel - DIEHL, Carl - MOTÁČKOVÁ, Veronika - ŠANDEROVÁ, Hana - ŽÍDEK, Lukáš - KRÁSNÝ, Libor - SKLENÁŘ, Vladimír - AKKE, Mikael.
ANALYSIS OF BACKBONE MOTIONS OF DELTA SUBUNIT OF RNA POLYMERASE FROM BACILLUS SUBTILIS. 2010.

Cooperativity between subunits is essential for high affinity binding of N-acetylhexosamines to dimeric soluble and dimeric cellular forms of human CD69

KAVAN, Daniel - KUBÍČKOVÁ, Monika - BILÝ, Jan - VANĚK, Ondřej - HOFBAUEROVÁ, Kateřina - HYNEK, Mrázek - DANIEL, Rozbeský - PAVLA, Bojarová - KŘEN, Vladimír - ŽÍDEK, Lukáš - SKLENÁŘ, Vladimír - BEZOUŠKA, Karel.
Cooperativity between subunits is essential for high affinity binding of N-acetylhexosamines to dimeric soluble and dimeric cellular forms of human CD69. Biochemistry, Washington, USA, American Chemical Society. ISSN 0006-2960, 2010, vol. 49, no. 19, pp. 4060-4067.

NMR as a tool for studies of (partially) disordered proteins and their interactions

PAPOUŠKOVÁ, Veronika - ŽÍDEK, Lukáš - SKLENÁŘ, Vladimír - KRÁSNÝ, Libor - KOZMINSKI, Wiktor.
NMR as a tool for studies of (partially) disordered proteins and their interactions. 2010.

Phosphorus Chemical Shifts in a Nucleic Acid Backbone from Combined Molecular Dynamics and Density Functional Calculations

PŘECECHTĚLOVÁ, Jana - NOVÁK, Petr - MUNZAROVÁ, Markéta - KAUPP, Martin - SKLENÁŘ, Vladimír.
Phosphorus Chemical Shifts in a Nucleic Acid Backbone from Combined Molecular Dynamics and Density Functional Calculations. The Journal of the American Chemical Society, Washington, D.C., American Chemical Society, USA. ISSN 0002-7863, 2010, vol. 132, no. 48, 17139–17148-10 pp.

S3EPY: a Sparky extension for determination of small scalar couplings from spin-state-selective excitation NMR experiments

NOVÁK, Petr - ŽÍDEK, Lukáš - MOTÁČKOVÁ, Veronika - PADRTA, Petr - ŠVENKOVÁ, Alžbeta - NUZILLARD, Jean Marc - KRÁSNÝ, Libor - SKLENÁŘ, Vladimír.
S3EPY: a Sparky extension for determination of small scalar couplings from spin-state-selective excitation NMR experiments. Journal of Biomolecular NMR, Dordrecht, Springer Netherlands, The Nederlands. ISSN 0925-2738, 2010, vol. 46, no. 2, pp. 191-197.

Solution structure of the N-terminal domain of Bacillus subtilis delta subunit of RNA polymerase and its classification based on structural homologs

MOTÁČKOVÁ, Veronika - ŠANDEROVÁ, Hana - ŽÍDEK, Lukáš - NOVÁČEK, Jiří - PADRTA, Petr - ŠVENKOVÁ, Alžběta - KORELUSOVÁ, Jana - JONÁK, Jiří - KRÁSNÝ, Libor - SKLENÁŘ, Vladimír.
Solution structure of the N-terminal domain of Bacillus subtilis delta subunit of RNA polymerase and its classification based on structural homologs. Proteins: Structure, Function, and Bioinformatics, USA, John Wiley and Sons, USA. ISSN 0887-3585, 2010, vol. 78, no. 7, pp. 1807-1810.

Strategy for complete NMR assignment of disordered proteins with highly repetitive sequences based on resolution-enhanced 5D experiments

MOTÁČKOVÁ, Veronika - NOVÁČEK, Jiří - ZAWADZKA-KAZIMIERCZUK, Anna - KAZIMIERCZUK, Krzysztof - ŽÍDEK, Lukáš - ŠANDEROVÁ, Hana - KRÁSNÝ, Libor - KOZMINSKI, Wiktor - SKLENÁŘ, Vladimír.
Strategy for complete NMR assignment of disordered proteins with highly repetitive sequences based on resolution-enhanced 5D experiments. Journal of Biomolecular NMR, Netherlands, Springer Netherlands, The Nederlands. ISSN 0925-2738, 2010, vol. 48, no. 3, pp. 169-177.

Structure and dynamics of an RNA polymerase subunit unique for gram-positive bacteria

MOTÁČKOVÁ, Veronika - KADEŘÁVEK, Pavel - ŽÍDEK, Lukáš - ŠANDEROVÁ, Hana - PADRTA, Petr - NOVÁČEK, Jiří - ŠVENKOVÁ, Alžběta - KORELUSOVÁ, Jana - ZAWADZKA-KAZIMIERCZUK, Anna - KAZIMIERCZUK, Krzysztof - KOŹMIŃSKI, Wiktor - KRÁSNÝ, Libor - SKLENÁŘ, Vladimír.
Structure and dynamics of an RNA polymerase subunit unique for gram-positive bacteria. 2010.

Structure and dynamics of delta subunit of RNA polymerase from Bacillus subtilis

KADEŘÁVEK, Pavel - MOTÁČKOVÁ, Veronika - PADRTA, Petr - DIEHL, Carl - ŠANDEROVÁ, Hana - ŽÍDEK, Lukáš - KRÁSNÝ, Libor - SKLENÁŘ, Vladimír - AKKE, Mikael.
Structure and dynamics of delta subunit of RNA polymerase from Bacillus subtilis. 2010.

Structure determination of an RNA polymerase subunit unique for gram-positive bacteria

book cover MOTÁČKOVÁ, Veronika - ŽÍDEK, Lukáš - SKLENÁŘ, Vladimír.
Structure determination of an RNA polymerase subunit unique for gram-positive bacteria. 2010. ISBN 978-80-210-5164-5.

Synthetic N-acetylglucosamine based fully branched tetrasaccharide, a mimetic of the endogenous ligand for CD69, activates CD69+ NK cells and killer lymphocytes upon dimerization via a hydrophilic flexible linker

KOVALOVÁ, Anna - LEDVINA, Miroslav - ŠAMAN, David - ZYKA, Daniel - KUBÍČKOVÁ, Monika - ŽÍDEK, Lukáš - SKLENÁŘ, Vladimír - POMPACH, Petr - KAVAN, Daniel - BÍLÝ, Jan - VANĚK, Ondřej - KUBÍNKOVÁ, Zuzana - VANČUROVÁ, Markéta - ANTOLÍKOVÁ, Mária - LEJSKOVÁ, Zuzana - MRÁZEK, Hynek - ROZBESKÝ, Daniel - HOFBAUEROVÁ, Kateřina - KŘEN, Vladimír - BEZOUŠKA, Karel.
Synthetic N-acetylglucosamine based fully branched tetrasaccharide, a mimetic of the endogenous ligand for CD69, activates CD69+ NK cells and killer lymphocytes upon dimerization via a hydrophilic flexible linker. Journal of Medicinal Chemistry, USA, American Chemical Society, USA. ISSN 0022-2623, 2010, vol. 53, no. 10, 16 pp.

2009

ANTROPOLOGICKÝ SLOVNÍK (s přihlédnutím k dějinám literatury a umění) aneb co by mohl o člověku vědět každý člověk

book cover MALINA, Jaroslav - ANTALÍK, Dalibor - BAHENSKÝ, František - BĚLKA, Luboš - BERAN-CIMBŮRKOVÁ, Petra - BOBEROVÁ, Kateřina - BRAVENÝ, Pavel - BUDIL, Ivo - ČAPKA, František - ČERMÁKOVÁ, Eva - ČIHÁK, Roman - ČUTA, Martin - DOHNALOVÁ, Marie - DRESLEROVÁ, Gabriela - DUBOVÝ, Petr - DUDA, Josef - DUCHEČKOVÁ, Petra - ELIÁŠOVÁ, Hana - ENDLICHEROVÁ, Michaela - FERRAROVÁ, Eva - FIALOVÁ, Dana - FILIPSKÝ, Jan - FUCHS, Eduard - GAISLER, Jiří - GOLEC, Martin - GRÍGELOVÁ, Andrea - HLAVÁČEK, Petr - HLOŽEK, Martin - HOLUB, Martin - HONCOOPOVÁ, Helena - HORÁČKOVÁ, Ladislava - HORKÝ, Drahomír - HORYNA, Břetislav - HÖSCHEL, Cyril - HRUŠKA, Blahoslav - HUBÁČEK, Ondřej - CHARVÁT, Petr - HUTÁK, Jan - JAKLOVÁ, Alena - JURDA, Mikoláš - JUSTOŇ, Zdeněk - KELLER, Jan - KLEMPEREROVÁ, Helena - KOLMAŠ, Josef - KOMENDA, Stanislav - KONÁŠOVÁ, Kateřina - KOVÁRNÍK, Jaromír - KRÁLÍK, Miroslav - KRÁLÍKOVÁ, Michaela - KRÁSNÁ, Soňa - KŘIVANOVÁ, Michaela - KULDOVÁ, Tereza - LAŠTOVIČKOVÁ, Monika - LINHARTOVÁ, Věra - LÍZAL, Pavel - LÖWENSTEINOVÁ, Miriam - MACÚCHOVÁ, Klára - MACHALOVÁ, Tatiana - MACHOLÁN, Miloš - MAIELLO, Giuseppe - MIKEŠOVÁ, Tereza - MORAVČÍKOVÁ, Zuzana - MORNSTEIN, Vojtěch - MORNSTEINOVÁ, Lucie - MOŘKOVSKÝ, Tomáš - MUSIL, Rudolf - NAKONEČNÝ, Milan - NOSEK, Bedřich - NOVÁKOVÁ, Marie - NOVÁKOVÁ, Nea - NOVOTNÝ, Vladimír - OLIVERIUS, Jaroslav - OLIVOVÁ, Lucie - PÁČ, Libor - PAPOUŠEK, Dalibor - PARDYOVÁ, Marie - PAVLÍK, Josef - PEČÍRKOVÁ, Jana - PECHA, Lukáš - PECHNÍKOVÁ, Markéta - PĚNIČKA, Robin - PETRÁSKOVÁ, Jana - PETRUSEK, Miloslav - PFLEGEROVÁ, Mariana - PLESKALOVÁ, Jana - POSPÍŠIL, Ivo - PROKOPEC, Miroslav - PROSECKÝ, Jiří - PRUDKÝ, Martin - PŘÍVRATSKÝ, Vladimír - PÚTOVÁ, Barbora - RAČANSKÁ, Michaela - RELICHOVÁ, Jiřina - RENDLOVÁ, Markéta - REZÁKOVÁ, Olga - RYCHLÍK, Martin - ŘIHÁKOVÁ, Alena - SÁZELOVÁ, Sandra - SEHNAL, František - SKLENÁŘ, Vladimír - SKUPNIK, Jaroslav - SLABINA, Miloslav - SMETÁČKOVÁ, Irena - SOCHOROVÁ, Ludmila - SOJKOVÁ, Tereza - SOUČEK, Vladimír - SOUKUP, Martin - SOUKUP, Václav - STEINBACHOVÁ, Eva - SVOBODA, Jiří - ŠATAVA, Leoš - ŠEDINOVÁ, Jiřina - ŠÍN, Lukáš - ŠTĚDROŇ, Miloš - ŠULOVÁ, Helena - ŠULOVÁ, Lenka - THÉR, Richard - TOŠNER, Michal - TVRDÝ, Zdeněk - UHEREK, Zdeněk - UNGER, Josef - URBANOVÁ, Petra - VACHALA, Břetislav - VANČATA, Václav - VANČATOVÁ, Marina - VAŇHAROVÁ, Michaela - VARGOVÁ, Lenka - VORLÍČEK, Jiří - VRHEL, František - WAGENKNECHTOVÁ, Martina - WEINEROVÁ, Renata - WINKLER, Jiří - RAŠKOVÁ ZELINKOVÁ, Michaela - ZOUFALÁ, Marcela - ZVĚŘINA, Jaroslav - BENEŠ, Milan - BLÁHOVÁ-SKLENÁŘOVÁ, Zuzana - BLAŽEK, Vladimír - BUBENÍK, Vít - BUDILOVÁ, Lenka - BUREŠ, Petr - ČERNÝ, Miroslav - DUFEK, Pavel - HELLER, Jan - HIRT, Tomáš - HLUŠIČKA, Jiří - HNILICA, Karel - HOLČÍK, Jan - HORSÁK, Michal - JAKOUBEK, Marek - KANDERT, Josef - KAŠPAR, Oldřich - KORECKÁ, Zuzana - KOMÁREK, Stanislav - LAPKA, Miloslav - MACHALÍK, Tomáš - MATĚJŮ, Martin - MUCHNOVÁ, Dagmar - NEČASOVÁ, Lucie - NOVÁK, Vlastimil - NOVOTNÝ, Jan - PAVELKA, Jiří - PAVLÍK, Petr - SADEK, Vladimír - SKLENÁŘ, Karel - SOKOLOVÁ, Věra - SOUČKOVÁ, Jana - SÝKORA, Jan - ŠTĚPÁNOVÁ, Irena - VÁLKOVÁ, Jana - VANĚK, Daniel - WOITSCH, Jiří - ZÁHOŘÍK, Jan - ZACHOVÁ, Markéta.
ANTROPOLOGICKÝ SLOVNÍK (s přihlédnutím k dějinám literatury a umění) aneb co by mohl o člověku vědět každý člověk. Vyd. 1. Brno : Akademické nakladatelství CERM v Brně, 2009. 4738 pp. Neuveden. ISBN 978-80-7204-560-0.

Backbone 1H, 13C, and 15N NMR assignment for the inactive form of the retroviral protease of the murine intracisternal A-type particle, inMIA-14 PR

MOTÁČKOVÁ, Veronika - KUBÍČKOVÁ, Monika - KOŽÍŠEK, Milan - GRANTZ ŠAŠKOVÁ, Klára - ŠVEC, Martin - ŽÍDEK, Lukáš - SKLENÁŘ, Vladimír.
Backbone 1H, 13C, and 15N NMR assignment for the inactive form of the retroviral protease of the murine intracisternal A-type particle, inMIA-14 PR. Biomolecular NMR Assignments, Netherlands, Springer Netherlands, USA. ISSN 1874-2718, 2009, vol. 3, no. 2, pp. 261-264.

C-13 Chemical Shifts – Structure Relationships In Nucleic Acids

NOVÁK, Petr - SKLENÁŘ, Vladimír - FIALA, Radovan.
C-13 Chemical Shifts – Structure Relationships In Nucleic Acids. 2009. ISBN 978-80-86441-40-5.

Effects of magnesium binding and beryllofluoridation on a component of the cytokinin signaling pathway studied by nuclear magnetic resonance

TŘÍSKOVÁ, Olga - PEKÁROVÁ, Blanka - MOTÁČKOVÁ, Veronika - ŽÍDEK, Lukáš - SKLENÁŘ, Vladimír - MAREK, Jaromír - JANDA, Lubomír.
Effects of magnesium binding and beryllofluoridation on a component of the cytokinin signaling pathway studied by nuclear magnetic resonance. 2009. In VII Discussions in Structural Molecular Biology Nové Hrady.

Investigation of Thermal Denaturation of Barley Nonspecific Lipid Transfer Protein 1 (ns-LTP1b) by Nuclear Magnetic Resonance and Differential Scanning Calorimetry

MATEJKOVÁ, Michaela - ŹÍDKOVÁ, Jitka - ŽÍDEK, Lukáš - WIMMEROVÁ, Michaela - CHMELÍK, Josef - SKLENÁŘ, Vladimír.
Investigation of Thermal Denaturation of Barley Nonspecific Lipid Transfer Protein 1 (ns-LTP1b) by Nuclear Magnetic Resonance and Differential Scanning Calorimetry. Journal of Agricultural and Food Chemistry, WASHINGTON, AMER CHEMICAL SOC, USA. ISSN 0021-8561, 2009, vol. 57, no. 18, pp. 8444-8452.

MAGE (melanoma-associated antigen) Domain structural studies using NMR

BATHULA, Sreenivas Reddy - PALEČEK, Jan - ŽÍDEK, Lukáš - SKLENÁŘ, Vladimír.
MAGE (melanoma-associated antigen) Domain structural studies using NMR. 2009.

NMR structural study of N-terminal domain of RNA polymerase delta subunit from Bacillus subtilis

MOTÁČKOVÁ, Veronika - ŠANDEROVÁ, Hana - NOVÁČEK, Jiří - ŽÍDEK, Lukáš - KRÁSNÝ, Libor - SKLENÁŘ, Vladimír.
NMR structural study of N-terminal domain of RNA polymerase delta subunit from Bacillus subtilis. 2009.

NMR Structure of the N-Terminal Domain of Capsid Protein from the Mason-Pfizer Monkey Virus

MACEK, Pavel - CHMELÍK, Josef - KŘÍŽOVÁ, Ivana - KADEŘÁVEK, Pavel - PADRTA, Petr - ŽÍDEK, Lukáš - WILDOVÁ, Marcela - HADRAVOVÁ, Romana - CHALOUPKOVÁ, Radka - PICHOVÁ, Iva - RUML, Tomáš - RUMLOVÁ, Michaela - SKLENÁŘ, Vladimír.
NMR Structure of the N-Terminal Domain of Capsid Protein from the Mason-Pfizer Monkey Virus. Journal of Molecular Biology, The Nederlands. ISSN 0022-2836, 2009, vol. 392, no. 1, pp. 100-114.

Prediction of C-13 chemical shifts in nucleic acids

NOVÁK, Petr - SKLENÁŘ, Vladimír - FIALA, Radovan.
Prediction of C-13 chemical shifts in nucleic acids. 2009.

Structural study of an RNA polymerase subunit unique for gram-positive bacteria

MOTÁČKOVÁ, Veronika - ŠANDEROVÁ, Hana - NOVÁČEK, Jiří - ŽÍDEK, Lukáš - KRÁSNÝ, Libor - SKLENÁŘ, Vladimír.
Structural study of an RNA polymerase subunit unique for gram-positive bacteria. 2009. ISBN 978-80-86441-40-5.

2008

1H, 13C, and 15N Resonance Assignment of the N-terminal Domain of Mason-Pfizer Monkey Virus Capsid Protein, CA1-140.

MACEK, Pavel - ŽÍDEK, Lukáš - RUMLOVÁ, Michaela - PÍCHOVÁ, Ivana - SKLENÁŘ, Vladimír.
1H, 13C, and 15N Resonance Assignment of the N-terminal Domain of Mason-Pfizer Monkey Virus Capsid Protein, CA1-140. Biomolecular NMr Assignments, Netherlands, Springer Netherlands, The Nederlands. ISSN 1874-2718, 2008, vol. 2, no. 1, pp. 43-45.

31P Chemical Shift Tensors for Canonical and Non-Canonical Nucleic Acid Conformations: DFT Calculations and NMR Implications.

PŘECECHTĚLOVÁ, Jana - PADRTA, Petr - MUNZAROVÁ, Markéta - SKLENÁŘ, Vladimír.
31P Chemical Shift Tensors for Canonical and Non-Canonical Nucleic Acid Conformations: DFT Calculations and NMR Implications. Journal of Physical Chemistry B, American Chemical Society. ISSN 1520-6106, 2008, vol. 112, no. 11, pp. 3470-3478.

Calculation of 13C chemical shifts in Pseudoknot

PŘECECHTĚLOVÁ, Jana - NOVAK, Petr - SKLENÁŘ, Vladimír.
Calculation of 13C chemical shifts in Pseudoknot. 2008.

Effect of Counter Ions on Cross-Correlated Relaxation Rates in Nucleic Acids

TRANTÍREK, Lukáš - SKLENÁŘ, Vladimír - FIALA, Radovan.
Effect of Counter Ions on Cross-Correlated Relaxation Rates in Nucleic Acids. In XXIII International Conference on Magnetic Resonance in Biological Systems. San Diego : ICMRBS, 2008. p. 117-117. 24.8.2006, San Diego.

NMR study of a single-stranded DNA binding to the C-terminal domain of the protease from murine intracisternal A-type particle

MOTÁČKOVÁ, Veronika - KUBÍČKOVÁ, Monika - ŠVEC, Martin - KOŽÍŠEK, Milan - ŽÍDEK, Lukáš - KONVALINKA, Jan - SKLENÁŘ, Vladimír.
NMR study of a single-stranded DNA binding to the C-terminal domain of the protease from murine intracisternal A-type particle. 2008.

P-31 Chemical Shift Tensors in Nucleic Acids from the Quantum Chemistry Point of View

PRECECHTELOVA, Jana - PADRTA, Petr - MUNZAROVA, Marketa - SKLENÁŘ, Vladimír.
P-31 Chemical Shift Tensors in Nucleic Acids from the Quantum Chemistry Point of View. In 23rd NMR Valtice. Vyd. 2008. Brno : Masaryk University, 2008. ISBN 978-80-86441-39-9, p. 7-7. 20.4.2008, Valtice.

Soluble recombinant CD69 receptors optimized to have an exceptional physical and chemicsl stability display prolonged circulation and remain intact in the blood of mice

VANĚK, Ondřej - KUBÍČKOVÁ, Monika - KAVAN, Daniel - BOROVIČKOVÁ, Ivana - POMPACH, Petr - NOVÁK, Petr - KUMAR, Vinay - VANNUCCI, Luca - HUDEČEK, Jiří - HOFBAUEROVÁ, Kateřina - KOPECKÝ, Vladimír, Jr - BRYNDA, Jiří - KOLENO, Petr - DOHNÁLEK, Jan - KADEŘÁVEK, Pavel - CHMELÍK, Josef - GORČÍK, Lukáš - ŽÍDEK, Lukáš - SKLENÁŘ, Vladimír - BEZOUŠKA, Karel.
Soluble recombinant CD69 receptors optimized to have an exceptional physical and chemicsl stability display prolonged circulation and remain intact in the blood of mice. the FEBS Journal. ISSN 1742-464X, 2008, vol. 2008, no. 275, pp. 5589-5606.

Temperature denaturation of Lipid Transfer Protein 1 studied by NMR and DSC

ŽÍDKOVÁ, Jitka - MATEJKOVÁ, Michaela - ŽÍDEK, Lukáš - WIMMEROVÁ, Michaela - SKLENÁŘ, Vladimír.
Temperature denaturation of Lipid Transfer Protein 1 studied by NMR and DSC. In 23rd NMR Valtice. Brno : Masarykova Univerzita, 2008. ISBN 978-80-86441-39-9, p. 39-39. 2008, Valtice.

2007

13C detected NMR experiments for measuring chemical shifts and coupling constants in nucleic acid bases

FIALA, Radovan - SKLENÁŘ, Vladimír.
13C detected NMR experiments for measuring chemical shifts and coupling constants in nucleic acid bases. Journal of Biomolecular NMR, Dordrecht, Springer Netherlands, The Nederlands. ISSN 0925-2738, 2007, vol. 39, no. 4, pp. 153-163.

13C-detected NMR experiments for measuring scalar and dipolar coupling in RNA

FIALA, Radovan - SKLENÁŘ, Vladimír.
13C-detected NMR experiments for measuring scalar and dipolar coupling in RNA. In Viral RNA: Structure, Function and Targeting. Vyd. 1. Heidelberg : EMBL, 2007. p. 39-39. 2007, Heidelberg.

Backbone Motions of Free and Pheromone-Bound Major Urinary Protein I Studied by Molecular Dynamics Simulation

MACEK, Pavel - NOVÁK, Petr - ŽÍDEK, Lukáš - SKLENÁŘ, Vladimír.
Backbone Motions of Free and Pheromone-Bound Major Urinary Protein I Studied by Molecular Dynamics Simulation. Journal of Physical Chemistry B, USA, The American Chemical Society, USA. ISSN 1089-5639, 2007, vol. 111, no. 20, pp. 5731-5739.

Conformational Dependence of 31P Chemical Shift Tensors in Nucleic Acids

PRECECHTELOVA, Jana - MUNZAROVÁ, Markéta - SKLENÁŘ, Vladimír.
Conformational Dependence of 31P Chemical Shift Tensors in Nucleic Acids. Heidelberg : EMBL Heidelberg, 2007. 1 p.

Dispersive interactions govern strong thermal stability of a protein

VONDRÁŠEK, Jiří - KUBAŘ, Tomáš - JENNEY, JR., Francis E. - ADAMS, Michael W.W. - KOŽÍŠEK, Milan - ČERNÝ, Jiří - SKLENÁŘ, Vladimír - HOBZA, Pavel.
Dispersive interactions govern strong thermal stability of a protein. Chemistry- A European Journal, Germany. ISSN 0947-6539, 2007, vol. 13, no. 32, pp. 9022-9027.

Dynamics of major urinary protein-pheromone interactions: Insight by NMR and MD simulations

MACEK, Pavel - NOVÁK, Petr - KŘÍŽOVÁ, Hana - ŽÍDEK, Lukáš - SKLENÁŘ, Vladimír.
Dynamics of major urinary protein-pheromone interactions: Insight by NMR and MD simulations. In ISMAR 2007, Program and Abstracts. Taiwan : Taiwan Magnetic Resonance Society, 2007. p. 63-63. 14.10.2007, Kenting, Taiwan. pozvaná přednáška.

Dynamics of protein-ligand interactions: Insight by NMR and MD simulations

MACEK, Pavel - NOVÁK, Petr - KŘÍŽOVÁ, Hana - ŽÍDEK, Lukáš - SKLENÁŘ, Vladimír.
Dynamics of protein-ligand interactions: Insight by NMR and MD simulations. In Advances and Managment of NMR in Life Sciences. Florencie : CERM, Florence University, 2007. p. 25-25. 18.1.2007, Florencie.

Novel 13C-detected Experiments for Nucleic Acids

FIALA, Radovan - SKLENÁŘ, Vladimír.
Novel 13C-detected Experiments for Nucleic Acids. In 11th Chianti Workshop on Magnetic Resonance. Vyd. 1. Vallombrosa : CERM, 2007. p. 60-60. 3.6.2007, Vallombrosa.

P-31 Chemical Shift Tensors in RNA and DNA Backbone. A DFT Study of Conformational Dependence and Its Implications for NMR Studies.

PŘECECHTĚLOVÁ, Jana - PADRTA, Petr - MUNZAROVÁ, Markéta - SKLENÁŘ, Vladimír.
P-31 Chemical Shift Tensors in RNA and DNA Backbone. A DFT Study of Conformational Dependence and Its Implications for NMR Studies. 2007.

Program for Analysis of Internal Motion in Molecular Dynamics Simulation

NOVÁK, Petr - ŽÍDEK, Lukáš - MACEK, Pavel - PADRTA, Petr - SKLENÁŘ, Vladimír.
Program for Analysis of Internal Motion in Molecular Dynamics Simulation. In Konference mladých vědeckých pracovníků "Strukturní biofyzika makromolekul". Brno : Biofyzikální ústav AV CR a Masarykova univerzita-Přírodovědecká fakulta, 2007. 1 p. 23.7.2007, Brno.

Purine derivatives: Substituent effects as monitored by NMR

MALIŇÁKOVÁ, Kateřina - ZACHAROVÁ, Zuzana - STANDARA, Stanislav - TOUŠEK, Jaromír - HOCEK, Michal - SKLENÁŘ, Vladimír - MAREK, Radek.
Purine derivatives: Substituent effects as monitored by NMR. 2007.

Relationships between 31P Chemical Shift Tensors and Conformation of Nucleic Acid Backbobe: A DFT Study

PRECECHTELOVA, Jana - MUNZAROVÁ, Markéta - NOVÁK, Petr - SKLENÁŘ, Vladimír.
Relationships between 31P Chemical Shift Tensors and Conformation of Nucleic Acid Backbobe: A DFT Study. Journal of Physical Chemistry B, American Chemical Society. ISSN 1520-6106, 2007, vol. 111, no. 12, pp. 2658-2667.

Structure of Bombyx mori chemosensory protein 1 in solution

JANSEN, Séverine - CHMELÍK, Josef - ŽÍDEK, Lukáš - PADRTA, Petr - NOVÁK, Petr - ZDRÁHAL, Zbyněk - PICIMBON, Jean-François - LÖFSTEDT, Christer - SKLENÁŘ, Vladimír.
Structure of Bombyx mori chemosensory protein 1 in solution. Archives of Insect Biochemistry and Physiology, Wiley, USA. ISSN 0739-4462, 2007, vol. 66, no. 3, pp. 135-145.

2006

<I>N</I>-Alkylpurine derivatives as model systems of purine tautomers: Study of substitution effects on solution-state NMR parameters

MALIŇÁKOVÁ, Kateřina - ZACHAROVÁ, Zuzana - STANDARA, Stanislav - TOUŠEK, Jaromír - HOCEK, Michal - SKLENÁŘ, Vladimír - MAREK, Radek.
<I>N</I>-Alkylpurine derivatives as model systems of purine tautomers: Study of substitution effects on solution-state NMR parameters. 2006. ISBN 80-86441-37-7.

1H, 13C, and 15N resonance assignment of Bombyx mori chemosensory protein 1 (BmorCSP1)

JANSEN, Séverine - ŽÍDEK, Lukáš - LÖFSTEDT, Christer - PICIMBON, Jean-Francois - SKLENÁŘ, Vladimír.
1H, 13C, and 15N resonance assignment of Bombyx mori chemosensory protein 1 (BmorCSP1). Journal of Biomolecular NMR, ESCOM Science Publishers B.V., The Nederlands. ISSN 0925-2738, 2006, vol. 36, no. 5, p. 47-47.

Conformational Dependence of 31P Chemical Shift Tensors

PŘECECHTĚLOVÁ, Jana - MUNZAROVÁ, Markéta - SKLENÁŘ, Vladimír.
Conformational Dependence of 31P Chemical Shift Tensors. Nemecko : Humboldt Universtaet Berlin, 2006. 1 p.

Dynamics of Protein-Ligand Interactions

SKLENÁŘ, Vladimír.
Dynamics of Protein-Ligand Interactions. In Frontieres of Biomolecular NMR. Lubjlana : Narodna i univerzitetna knjižnica, Ljubljana, 2006. ISBN 961-6104-08-X, p. 41-41. 2006, Ljubljana.

MD/DFT STUDY OF ENVIRONMENTAL EFFECTS ON 31P CHEMICAL SHIFT TENSORS IN B-DNA

PRECECHTELOVA, Jana - NOVÁK, Petr - KAUPP, Martin - MUNZAROVÁ, Markéta - SKLENÁŘ, Vladimír.
MD/DFT STUDY OF ENVIRONMENTAL EFFECTS ON 31P CHEMICAL SHIFT TENSORS IN B-DNA. Materials Structure in Chemistry, Biology, Physics and Technology, Praha, . ISSN 1211-5894, 2006, vol. 13, no. 1, p. 34-34.

Measurement of Long Range 1H-19F Scalar Coupling Constants and their Glycosidic Torsion Dependence in 5-Fluoropyrimidine Substituted RNA.

HENNIG, Mirko - MUNZAROVA, Marketa - BERMEL, Wolfgang - SCOTT, Lincol G. - SKLENAR, Vladimir - WILLIAMSON, James R..
Measurement of Long Range 1H-19F Scalar Coupling Constants and their Glycosidic Torsion Dependence in 5-Fluoropyrimidine Substituted RNA. Journal of the American Chemical Society, Washington, D.C., American Chemical Society, USA. ISSN 0002-7863, 2006, vol. 128, no. 17, pp. 5851-5858.

Molecular dynamics study of major urinary protein-pheromone interactions: A structural model for ligand-induced flexibility increase

MACEK, Pavel - NOVÁK, Petr - KŘÍŽOVÁ, Hana - ŽÍDEK, Lukáš - SKLENÁŘ, Vladimír.
Molecular dynamics study of major urinary protein-pheromone interactions: A structural model for ligand-induced flexibility increase. FEBS Letters, Amsterdam, Elsevier Science B.V., The Nederlands. ISSN 0014-5793, 2006, vol. 580, no. 1, pp. 682-684.

NMR Distance Restraints At Low Temperatures: Application To DNA Hairpin

MATEJKOVÁ, Michaela - NOVÁK, Petr - FIALA, Radovan - PADRTA, Petr - SKLENÁŘ, Vladimír.
NMR Distance Restraints At Low Temperatures: Application To DNA Hairpin. In International school on High field NMR spectroscopy for solids and liquids. Les Houches, France : Physics Centre, Les Houches, 2006. p. 45-45. 14.5.2006, Les Houches, France.

NMR experiments for detection of quaternary carbons in nucleic acid bases.

FIALA, Radovan - SKLENÁŘ, Vladimír - MUNZAROVÁ, Markéta.
NMR experiments for detection of quaternary carbons in nucleic acid bases. In 8th Central European NMR Symposium. Vyd. 1. Debrecen : University of Debrecen, 2006. p. 1-1. 2006, Debrecen, Hungary.

NMR of Nucleic Acids - Little by Little

SKLENÁŘ, Vladimír - PŘECECHTĚLOVÁ, Jana - MUNZAROVÁ, Markéta - FIALA, Radovan.
NMR of Nucleic Acids - Little by Little. In XXII International Conference on Magnetic Resonance in Biological Systems. Göttingen : ICMRBS, 2006. p. 26-26. 20.8.2006, Göttingen.

NMR study of a single-stranded DNA binding to the C-terminal domain of retroviral proteinase

ŽÍDEK, Lukáš - ŠVEC, Martin - NÁLEZKOVÁ, Monika - KOŽÍŠEK, Milan - KONVALINKA, Jan - SKLENÁŘ, Vladimír.
NMR study of a single-stranded DNA binding to the C-terminal domain of retroviral proteinase. In XXII International Conference on Magnetic Resonance in Biological Systems. Göttingen : ICMRBS, 2006. p. 266-266. 20.8.2006, Göttingen.

NMR study of protein CD69

NÁLEZKOVÁ, Monika - GORČÍK, Lukáš - ŽÍDEK, Lukáš - SKLENÁŘ, Vladimír.
NMR study of protein CD69. Materials Structure in Chemistry, Biology, Physics and Technology, Czech Republic, Czech and Slovak Crystalographic Associa. ISSN 1211-5894, 2006, vol. 13, no. 1, p. 30-30.

Optical spectroscopy, mass spectrometry and NMR are essential tools in the production of soluble receptors of natural killer cells

BEZOUŠKA, Karel - KAVAN, Dan - VANEK, Ondrej - POMPACH, P. - MIHÓK, L. - BÍLÝ, Jan - NOVÁK, P. - HOFBAUEROVÁ, K. - KOPECKÝ, V., Jr - NÁLEZKOVÁ, Monika - ŽÍDEK, Lukáš - SKLENÁŘ, Vladimír.
Optical spectroscopy, mass spectrometry and NMR are essential tools in the production of soluble receptors of natural killer cells. Materials Structure in Chemistry, Biology, Physics and Technology, Czech Republic, Czech and Slovak Crystallographic Associ. ISSN 1211-5894, 2006, vol. 13, no. 1, p. 4-4.

PAIN: Program for Analysis of Internal motioN, An Application to MD Simulated Motions of Major Urinary Protein-I

NOVÁK, Petr - MACEK, Pavel - ŽÍDEK, Lukáš - SKLENÁŘ, Vladimír.
PAIN: Program for Analysis of Internal motioN, An Application to MD Simulated Motions of Major Urinary Protein-I. Materials Structure in Chemistry, Biology, Physics and Technology, Praha, . ISSN 1211-5894, 2006, vol. 13, no. 1, p. 31-31.

S3E.py – A TOOL FOR AUTOMATED ANALYSIS OF THE SPIN-STATE-SELECTIVE EXCITATION NMR SPECTRA

NOVÁK, Petr - ŽÍDEK, Lukáš - SKLENÁŘ, Vladimír.
S3E.py – A TOOL FOR AUTOMATED ANALYSIS OF THE SPIN-STATE-SELECTIVE EXCITATION NMR SPECTRA. In International school on High field NMR spectroscopy for solids and liquids. Les Houches, France : Physics Centre, Les Houches, 2006. p. 50-50. 14.5.2006, Les Houches, France.

Structural study of Thermoplasma acidophilum protein TA1019 by NMR spectroscopy

PAVELKOVÁ, Anna - CHMELÍK, Josef - MACEK, Pavel - ŽÍDEK, Lukáš - SKLENÁŘ, Vladimír.
Structural study of Thermoplasma acidophilum protein TA1019 by NMR spectroscopy. In XXII International Conference on Magnetic Resonance in Biological Systems. Göttingen : ICMRBS, 2006. p. 267-267. 20.8.2006, Göttingen.

Substituted purines: Experimental and theoretical study of NMR parameters

MALIŇÁKOVÁ, Kateřina - STANDARA, Stanislav - ZACHAROVÁ, Zuzana - TOUŠEK, Jaromír - MAREK, Radek - SKLENÁŘ, Vladimír.
Substituted purines: Experimental and theoretical study of NMR parameters. 2006.

Theoretical Study of the Effects of DNA Stacking Interactions on the NMR Chemical Shifts

ŘEHA, David - SKLENÁŘ, Vladimír.
Theoretical Study of the Effects of DNA Stacking Interactions on the NMR Chemical Shifts. In 21th NMR Valtice. Vyd. 1. Brno : Masarykova Univerzita, 2006. ISBN 80-86441-37-7, p. 32-32. 2006, Valtice.

2005

13C-Detected Experiments for NMR Spectroscopy of Nucleic Acids

FIALA, Radovan - SKLENÁŘ, Vladimír.
13C-Detected Experiments for NMR Spectroscopy of Nucleic Acids. In EUROMAR/EENC 2005. Vyd. 1. Veldhoven : Utrecht University, 2005. p. 388-388. 3.8.2005, Veldhoven.

Analysis of NMR Distance Restraints - An Application To DNA and RNA Hairpins

MATEJKOVÁ, Michaela - NOVÁK, Petr - FIALA, Radovan - PADRTA, Petr - SKLENÁŘ, Vladimír.
Analysis of NMR Distance Restraints - An Application To DNA and RNA Hairpins. In Konference mladých vědeckých pracovníků "Strukturní biofyzika makromolekul". Brno : Biofyzikální ústav AV CR a Masarykova univerzita-Přírodovědecká fakulta, 2005. p. 11-11. 2005, Brno.

Determination of N-H...H hydrogen bond strength by analyzing 15N chemical shift tensor and electron density

MAREK, Radek - TOUŠEK, Jaromír - BRUS, Jiří - MAREK, Jaromír - TRÁVNÍČEK, Zdeněk - SKLENÁŘ, Vladimír.
Determination of N-H.H hydrogen bond strength by analyzing 15N chemical shift tensor and electron density. In 20th NMR Valtice. Brno : Masaryk university, 2005. ISBN 80-210-3678-8, p. 21-21. 4.4.2005, Valtice.

Dynamics of Protein-Pheromone Interactions:Temperature Dependent Spectral Density Mapping and Molecular Dynamics Simulations.

SKLENÁŘ, Vladimír.
Dynamics of Protein-Pheromone Interactions:Temperature Dependent Spectral Density Mapping and Molecular Dynamics Simulations. In Magnetic Resonance in Physics, Chemistry, Biology, and Medicine. Berlín, SRN : Max-Planck-Institut für Polymerforschung, 2005. p. 14-14. 2005, Berlin/dresden.

NEW TOOLS FOR AN ANALYSIS OF EXPERIMENTAL (NMR) AND THEORETICAL (MD) DATA

NOVÁK, Petr - ŽÍDEK, Lukáš - MACEK, Pavel - PADRTA, Petr - SKLENÁŘ, Vladimír.
NEW TOOLS FOR AN ANALYSIS OF EXPERIMENTAL (NMR) AND THEORETICAL (MD) DATA. In Konference mladých vědeckých pracovníků "Strukturní biofyzika makromolekul". Brno : Biofyzikální ústav AV CR a Masarykova univerzita-Přírodovědecká fakulta, 2005. 1 p. 2005, Brno.

NMR Distance Restraints At Low temperatures : An Application To DNA Hairpin

MATEJKOVÁ, Michaela - NOVÁK, Petr - FIALA, Radovan - PADRTA, Petr - SKLENÁŘ, Vladimír.
NMR Distance Restraints At Low temperatures : An Application To DNA Hairpin. Materials Structure, Praha, The Czech and Slovak Cryst. Assoc. ISSN 1211-5894, 2005, vol. 12, no. 1, p. 33-33.

NMR Studies of Purines

MAREK, Radek - SKLENÁŘ, Vladimír.
NMR Studies of Purines. In Annual Reports on NMR Spectroscopy. London : Elsevier Ltd., 2005. 54, ISBN 0-12-505454-8, pp. 201-242.

NMR Study of Protein CD69

NÁLEZKOVÁ, Monika - ŽÍDEK, Lukáš - SKLENÁŘ, Vladimír.
NMR Study of Protein CD69. In Strukturni biofyzika makromolekul. Czech Republic : MU, 2005. p. 13-13. 16.12.2005, BFU AV CR Brno.

No Proton - No problem. Non-protonated Nuclei in NMR Studies of Nucleic Acids

SKLENÁŘ, Vladimír - FIALA, Radovan - MUNZAROVÁ, Markéta.
No Proton - No problem. Non-protonated Nuclei in NMR Studies of Nucleic Acids. In XXI International Conference on MagneticResonance in Biological Systems-Abstracts. Hyderabad, India : Vindhya Press, 2005. p. 57-57. 2005, Hyderabad, India.

Tautomeric Equilibria of Purine Derivatives Studied by Low-Temperature NMR Spectroscopy and Quantum Chemical Calculations

SEČKÁŘOVÁ, Pavlína - MAREK, Radek - TOUŠEK, Jaromír - HOCEK, Michal - KOLEHMAINEN, Erkki - SKLENÁŘ, Vladimír.
Tautomeric Equilibria of Purine Derivatives Studied by Low-Temperature NMR Spectroscopy and Quantum Chemical Calculations. In 20th NMR Valtice - Meeting of Central European NMR Discussion Groups. Brno : Masaryk University, 2005. ISBN 80-210-3678-8, p. 16-16. Valtice, April 4th-6th, 2005.

2004

1H-13C Correlation Experiments for Detection of Quaternary Carbons in Nucleic Acid Bases

FIALA, Radovan - MUNZAROVÁ, Markéta - SKLENÁŘ, Vladimír.
1H-13C Correlation Experiments for Detection of Quaternary Carbons in Nucleic Acid Bases. In Abstracts of the VIth Central European NMR Symposium. Vyd. 1. Linz, Rakousko : Linz University, 2004. p. 8-8. 27.9.2004, Linz, Rakousko.

Amide spectral density analysis and molecular dynamics simulation

KŘÍŽOVÁ, Hana - ŽÍDEK, Lukáš - MACEK, Pavel - NOVÁK, Petr - STONE, Martin J - NOVOTNY, Milos V - SKLENÁŘ, Vladimír.
Amide spectral density analysis and molecular dynamics simulation. In 45th ENC. Santa Fe : ENC, 2004. p. 47-47. 18.4.2004, Pacific Grove.

Analysis of Internal Motion from Molecular Dynamics of Major Urinary Protein I.

NOVÁK, Petr - MACEK, Pavel - ŽÍDEK, Lukáš - SKLENÁŘ, Vladimír.
Analysis of Internal Motion from Molecular Dynamics of Major Urinary Protein I. In Abstract of the VIth Central European NMR Symposium. Linz : Institut fur Organische Chemie der Johannes Keppler Universitat, Linz, Austria, 2004. p. 20-20. 27.9.2004, Linz, Austria.

Direct determination of tautomerism in purine derivatives by low-temperature NMR spectroscopy

SEČKÁŘOVÁ, Pavlína - MAREK, Radek - MALIŇÁKOVÁ, Kateřina - KOLEHMAINEN, Erkki - HOCKOVÁ, Dana - HOCEK, Michal - SKLENÁŘ, Vladimír.
Direct determination of tautomerism in purine derivatives by low-temperature NMR spectroscopy. Tetrahedron Letters, Oxford, Pergamon - Elsevier Science, Great Britain. ISSN 0040-4039, 2004, vol. 45, no. 33, pp. 6259-6263.

DNA A-tract bending in three dimensions: Solving the dA4T4 vs. dT4A4 conundrum

ŠTEFL, Richard - WU, Haihong - RAVINDRANATHAN, Sapna - SKLENÁŘ, Vladimír - FEIGON, Juli.
DNA A-tract bending in three dimensions: Solving the dA4T4 vs. dT4A4 conundrum. Proceedings of the National Academy of Sciences of the U.S.A., USA. ISSN 0027-8424, 2004, vol. 101, no. 5, pp. 1171-1176.

Experiments for Correlating Quaternary Carbons in RNA Bases

FIALA, Radovan - MUNZAROVÁ, Markéta - SKLENÁŘ, Vladimír.
Experiments for Correlating Quaternary Carbons in RNA Bases. Journal of Biomolecular NMR, Dordrecht, Kluwer/Escom, The Nederlands. ISSN 0925-2738, 2004, vol. 29, no. 4, pp. 477-490.

Experiments for Correlating Quaternary Carbons in RNA Bases

FIALA, Radovan - MUNZAROVÁ, Markéta - SKLENÁŘ, Vladimír.
Experiments for Correlating Quaternary Carbons in RNA Bases. In 19th NMR Valtice. Vyd. 1. Brno : Masarykova univerzita, 2004. ISBN 80-210-3352-5, p. 33-33. 19.4.2004, Valtice.

Experiments for Correlating Quaternary Carbons in RNA Bases

FIALA, Radovan - MUNZAROVÁ, Markéta - SKLENÁŘ, Vladimír.
Experiments for Correlating Quaternary Carbons in RNA Bases. In 17th EENC/32th AMPERE. Vyd. 1. Lille, France : EENC/AMPERE, 2004. p. 224-224. 6.9.2004, Lille, France.

INCREASED DYNAMICS OF MUP-I IN PRESENCE OF LIGAND: EVIDENCE FROM MD SIMULATION AND NMR SPIN RELAXATION

MACEK, Pavel - NOVÁK, Petr - KŘÍŽOVÁ, Hana - ŽÍDEK, Lukáš - SKLENÁŘ, Vladimír.
INCREASED DYNAMICS OF MUP-I IN PRESENCE OF LIGAND: EVIDENCE FROM MD SIMULATION AND NMR SPIN RELAXATION. In VIII. Pracovní setkání biochemiků a molekulárních biologů. Brno : Masarykova universita v Brně Přírodovědecká fakulta a Česká společnost pro biochemii a molekulární biologii, 2004. p. 31-31. 3.2.2004, Brno, Czech Republic.

NMR Distance Restraints At Low Temperatures : An Application to DNA Hairpin.

MATEJKOVÁ, Michaela - PADRTA, Petr - FIALA, Radovan - SKLENÁŘ, Vladimír.
NMR Distance Restraints At Low Temperatures : An Application to DNA Hairpin. In 19th NMR Valtice : Central European NMR Discussion Groups. Brno : Masarykova univerzita, 2004. ISBN 80-210-3352-5, p. 29-29. 19.4.2004, Valtice, Czech Republic.

Refinement of Trypanosoma U6 RNA Stem-Loop Structure Using 1- and 2-Bond Residual Dipolar Couplings

NOVÁK, Petr - ŽÍDEK, Lukáš - PADRTA, Petr - SKLENÁŘ, Vladimír.
Refinement of Trypanosoma U6 RNA Stem-Loop Structure Using 1- and 2-Bond Residual Dipolar Couplings. In 19th NMR Valtice. Brno : Masarykova universita v Brně, 2004. ISBN 80-210-3352-5, p. 30-30. 19.4.2004, Valtice, Czech Republic.

Structural Dependence of 31P Chemical Shielding Tensors: DFT Study

PRECECHTELOVA, Jana - MUNZAROVA, Marketa - SKLENAR, Vladimir.
Structural Dependence of 31P Chemical Shielding Tensors: DFT Study. Brno : Masarykova univerzita Brno, 2004. 1 p. ISBN 80-210-3352-5.

Tautomeric Equilibria of Purine Derivatives Studied by Low-Temperature NMR Spectroscopy

SEČKÁŘOVÁ, Pavlína - TOUŠEK, Jaromír - HOCEK, Michal - KOLEHMAINEN, Erkki - SKLENÁŘ, Vladimír - MAREK, Radek.
Tautomeric Equilibria of Purine Derivatives Studied by Low-Temperature NMR Spectroscopy. In VII Synthetic Chemistry Meeting and XXVI Finnish NMR Symposium. Jyväskylä, Finland : Department of Chemistry, University of Jyväskylä, 2004. ISBN 951-39-1846-7, p. 85-85. 8.6.2004, Keuruu, Finland.

Temperature Dependent Spectral Density Analysis Applied to Monitoring Backbone Dynamics of Major Urinary Protein-I Complexed with the Pheromone 2-sec-Butyl-4,5-dihydrothiazole

KŘÍŽOVÁ, Hana - ŽÍDEK, Lukáš - STONE, Martin J. - NOVOTNY, Milos V. - SKLENÁŘ, Vladimír.
Temperature Dependent Spectral Density Analysis Applied to Monitoring Backbone Dynamics of Major Urinary Protein-I Complexed with the Pheromone 2-sec-Butyl-4,5-dihydrothiazole. Journal of Biomolecular NMR, Dordrecht, Kluwer/Escom, The Nederlands. ISSN 0925-2738, 2004, vol. 28, no. 4, pp. 369-384.

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