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Mitogenomics of the endemic Ethiopian rats: looking for footprints of adaptive evolution in sky islands

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BARTÁKOVÁ Veronika BRYJOVÁ Anna NICOLAS Violaine LAVRENCHENKO Leonid A. BRYJA Josef

Rok publikování 2021
Druh Článek v odborném periodiku
Časopis / Zdroj Mitochondrion
Fakulta / Pracoviště MU

Přírodovědecká fakulta

Citace
www https://doi.org/10.1016/j.mito.2020.12.015
Doi http://dx.doi.org/10.1016/j.mito.2020.12.015
Klíčová slova Adaptation; Adaptive introgression; Positive selection; dN; dS; Oxidative phosphorylation; NADH dehydrogenase
Popis Organisms living in high altitude must adapt to environmental conditions with hypoxia and low temperature, e. g. by changes in the structure and function of proteins associated with oxidative phosphorylation in mitochondria. Here we analysed the signs of adaptive evolution in 27 mitogenomes of endemic Ethiopian rats (Stenocephalemys), where individual species adapted to different elevation. Significant signals of positive selection were detected in 10 of the 13 mitochondrial protein-coding genes, with a majority of functional substitutions in the NADH dehydrogenase complex. Higher frequency of positively selected sites was found in phylogenetic lineages corresponding to Afroalpine specialists.

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