doc. Mgr. David Bednář, Ph.D.
Head, Molecular Modelling and Bioinformatics
Correspondence Address:
Kotlářská 267/2, 611 37 Brno
E‑mail: |
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Total number of publications: 104
2024
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Computer-aided engineering of stabilized fibroblast growth factor 21
Computational and Structural Biotechnology Journal, year: 2024, volume: 23, edition: December 2024, DOI
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Exploring new galaxies: Perspectives on the discovery of novel PET-degrading enzymes
Applied Catalysis B: Environment and Energy, year: 2024, volume: 342, edition: March 2024, DOI
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FireProt 2.0: web-based platform for the fully automated design of thermostable proteins
Briefings in Bioinformatics, year: 2024, volume: 25, edition: 1, DOI
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ChannelsDB 2.0: a comprehensive database of protein tunnels and pores in AlphaFold era
Nucleic Acids Research, year: 2024, volume: 52, edition: D1, DOI
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InVADo: Interactive Visual Analysis of Molecular Docking Data
IEEE Transactions on Visualization and Computer Graphics, year: 2024, volume: 30, edition: 4, DOI
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PredictONCO: a web tool supporting decision-making in precision oncology by extending the bioinformatics predictions with advanced computing and machine learning
Briefings in Bioinformatics, year: 2024, volume: 25, edition: 1, DOI
2023
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Advancing Enzyme's Stability and Catalytic Efficiency through Synergy of Force-Field Calculations, Evolutionary Analysis, and Machine Learning
ACS Catalysis, year: 2023, volume: 13, edition: 19, DOI
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Atypical homodimerization revealed by the structure of the (S)-enantioselective haloalkane dehalogenase DmmarA from Mycobacterium marinum
Acta Crystallographica Section D: Structural Biology, year: 2023, volume: 79, edition: November, DOI
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Catalytic mechanism for Renilla-type luciferases
Nature Catalysis, year: 2023, volume: 6, edition: 1, DOI
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Comparison of Fungal Thermophilic and Mesophilic Catalase-Peroxidases for Their Antioxidative Properties
Antioxidants, year: 2023, volume: 12, edition: 7, DOI