Dmitriy Chudakov, Ph.D., DSc.

2024

• Aberrant adaptive immune response underlies genetic susceptibility to tuberculosis

  TSAREVA Anastasiia SHELYAKIN Pavel V SHAGINA Irina A MYSHKIN Mikhail Yu MERZLYAK Ekaterina M KRIUKOVA Valeriia V APT Alexander S LINGE Irina A CHUDAKOV Dmitriy BRITANOVA Olga V

  Article in Periodical

  Frontiers in immunology, year: 2024, volume: 15, edition: May, DOI

• Autologous T-Cell-Free Antigen Presentation System Unveils hCMV-Specific NK Cell Response

  USTIUZHANINA Maria O. STRELTSOVA Maria A. TIMOFEEV Nikita D. KRYUKOV Maxim A. CHUDAKOV Dmitriy KOVALENKO Elena I.

  Article in Periodical

  Advances in Fuel Cells, year: 2024, volume: 13, edition: 6, DOI

• B cell clonality in cancer

  BRYUSHKOVA E A MUSHENKOVA N V TURCHANINOVA M A LUKYANOV D K CHUDAKOV Dmitriy SEREBROVSKAYA E O

  Article in Periodical

  SEMINARS IN IMMUNOLOGY, year: 2024, volume: 72, edition: march, DOI

• Clonal structure and the specificity of vaccine-induced T cell response to SARS-CoV-2 Spike protein

  SHEETIKOV Saveliy A. KHMELEVSKAYA Alexandra A. ZORNIKOVA Ksenia V. ZVYAGIN Ivan V. SHOMURADOVA Alina S. SERDYUK Yana V. SHAKIROVA Naina T. PESHKOVA Iuliia O. TITOV Aleksei ROMANIUK Dmitrii S. SHAGINA Irina A. CHUDAKOV Dmitriy KIRYUKHIN Dmitry O. SHCHERBAKOVA Olga V. KHAMAGANOVA Ekaterina G. DZUTSEVA Vitalina AFANASIEV Andrei BOGOLYUBOVA Apollinariya V. EFIMOV Grigory A.

  Article in Periodical

  Frontiers in immunology, year: 2024, volume: 15, edition: Apr, DOI

• Convergence, plasticity, and tissue residence of regulatory T cell response via TCR repertoire prism

  NAKONECHNAYA Tatyana O. MOLTEDO Bruno PUTINTSEVA Ekaterina V. LEYN Sofya BOLOTIN Dmitry A. BRITANOVA Olga V. SHUGAY Mikhail CHUDAKOV Dmitriy

  Article in Periodical

  elife, year: 2024, volume: 12, edition: apr, DOI

• Structure-based prediction of T cell receptor recognition of unseen epitopes using TCRen

  KARNAUKHOV Vadim K SHCHERBININ Dmitrii S CHUGUNOV Anton O CHUDAKOV Dmitriy EFREMOV Roman G ZVYAGIN Ivan V SHUGAY Mikhail

  Article in Periodical

  NATURE COMPUTATIONAL SCIENCE, year: 2024, volume: 4, edition: 7, DOI

• The Antigen-Specific Response of NK Cells to SARS-CoV-2 Correlates With KIR2DS4 Expression

  USTIUZHANINA M O BOYKO A A VAVILOVA J D SINIAVIN A E STRELTSOVA M A ASTRAKHANTSEVA I V DRUTSKAYA M S CHUDAKOV Dmitriy KOVALENKO E I

  Article in Periodical

  Journal of Medical Virology, year: 2024, volume: 96, edition: 11, DOI

• Toolkit for mapping the clonal landscape of tumor-infiltrating B cells

  SEREBROVSKAYA E O BRYUSHKOVA E A LUKYANOV D K MUSHENKOVA N V CHUDAKOV Dmitriy TURCHANINOVA M A

  Article in Periodical

  SEMINARS IN IMMUNOLOGY, year: 2024, volume: 72, edition: march, DOI

• Ultrasensitive allele inference from immune repertoire sequencing data with MiXCR

  MIKELOV Artem NEFEDIEV George TASHKEEV Alexander RODRIGUEZ Oscar L DIEGO Aguilar Ortmans SKATOVA Valeriia IZRAELSON Mark DAVYDOV Alexey N POSLAVSKY Stanislav RAHMOUNI Souad WATSON Corey T CHUDAKOV Dmitriy BOYD Scott D BOLOTIN Dmitry

  Article in Periodical

  Genome research, year: 2024, volume: 34, edition: 12, DOI

2023

• Large-scale template-based structural modeling of T-cell receptors with known antigen specificity reveals complementarity features

  SHCHERBININ Dmitrii S KARNAUKHOV Vadim K ZVYAGIN Ivan V CHUDAKOV Dmitriy SHUGAY Mikhail

  Article in Periodical

  Frontiers in immunology, year: 2023, volume: 14, edition: Aug, DOI