RNDr. Lukáš Pravda, Ph.D.

2015

• WebChemistry: a platform for the detection, validation, comparison, and characterization of structural patterns in biomacromolecules

  SEHNAL David PRAVDA Lukáš IONESCU Crina-Maria SVOBODOVÁ VAŘEKOVÁ Radka KOČA Jaroslav

  Appeared in Conference without Proceedings

  Year: 2015, type: Appeared in Conference without Proceedings

2014

• Anatomy of enzymatic channels and algorithm for its detection

  PRAVDA Lukáš SVOBODOVÁ VAŘEKOVÁ Radka SEHNAL David IONESCU Crina-Maria BERKA Karel OTYEPKA Michal KOČA Jaroslav

  Appeared in Conference without Proceedings

  Year: 2014, type: Appeared in Conference without Proceedings

• Anatomy of Enzyme Channels

  PRAVDA Lukáš BERKA Karel SVOBODOVÁ VAŘEKOVÁ Radka SEHNAL David BANÁŠ Pavel ROMAN A Laskowski KOČA Jaroslav OTYEPKA Michal

  Article in Periodical

  BMC Bioinformatics, year: 2014, volume: 15, edition: november, DOI

• Atomic charge based descriptors and their applications in QSAR

  SVOBODOVÁ VAŘEKOVÁ Radka GEIDL Stanislav SEHNAL David PRAVDA Lukáš JURKA Zdeněk IONESCU Crina-Maria KOČA Jaroslav

  Appeared in Conference without Proceedings

  Year: 2014, type: Appeared in Conference without Proceedings

• Consistency of sugar structures and their annotation in the PDB

  JAISWAL Deepti SVOBODOVÁ VAŘEKOVÁ Radka SEHNAL David IONESCU Crina-Maria GEIDL Stanislav PRAVDA Lukáš HORSKÝ Vladimír WIMMEROVÁ Michaela KOČA Jaroslav

  Appeared in Conference without Proceedings

  Year: 2014, type: Appeared in Conference without Proceedings

• Ligand structures in the Protein Data Bank – can we trust them?

  SEHNAL David SVOBODOVÁ VAŘEKOVÁ Radka IONESCU Crina-Maria GEIDL Stanislav PRAVDA Lukáš JAISWAL Deepti WIMMEROVÁ Michaela KOČA Jaroslav

  Appeared in Conference without Proceedings

  Year: 2014, type: Appeared in Conference without Proceedings

• MOLE: Pokročilý nástroj pro vyhledávání a charakterizaci tunelů

  PRAVDA Lukáš SVOBODOVÁ VAŘEKOVÁ Radka SEHNAL David IONESCU Crina-Maria BERKA Karel OTYEPKA Michal KOČA Jaroslav

  Appeared in Conference without Proceedings

  Year: 2014, type: Appeared in Conference without Proceedings

• MotiveQuery: Language and Web Service for Fast Identification of Protein Structural Motifs in the Entire Protein Data Bank

  PRAVDA Lukáš SVOBODOVÁ VAŘEKOVÁ Radka SEHNAL David IONESCU Crina-Maria KOČA Jaroslav

  Appeared in Conference without Proceedings

  Year: 2014, type: Appeared in Conference without Proceedings

• MotiveValidator: interactive web-based validation of ligand and residue structure in biomolecular complexes

  SVOBODOVÁ VAŘEKOVÁ Radka JAISWAL Deepti SEHNAL David IONESCU Crina-Maria GEIDL Stanislav PRAVDA Lukáš HORSKÝ Vladimír WIMMEROVÁ Michaela KOČA Jaroslav

  Article in Periodical

  Nucleic Acids Research, year: 2014, volume: 42, edition: W1, DOI

• MotiveValidator: software for validation of ligand and residue structures in biomolecular complexes

  SVOBODOVÁ VAŘEKOVÁ Radka JAISWAL Deepti SEHNAL David IONESCU Crina-Maria GEIDL Stanislav PRAVDA Lukáš HORSKÝ Vladimír WIMMEROVÁ Michaela KOČA Jaroslav

  Year: 2014