Mgr. Petra Pokorná

2025

• crossNN is an explainable framework for cross-platform DNA methylation-based classification of tumors

  YUAN Dongsheng JUGAS Robin POKORNÁ Petra ŠTĚRBA Jaroslav SLABÝ Ondřej SCHMID Simone SIEWERT Christin OSBERG Brendan CAPPER David HALLDORSSON Skarphedinn VIK-MO Einar O ZEINER Pia S WEBER Katharina J HARTER Patrick N THOMAS Christian ALBERS Anne RECHSTEINER Markus REIMANN Regina APPELT Anton SCHUELLER Ulrich JABAREEN Nabil MACKOWIAK Sebastian ISHAQUE Naveed EILS Roland LUKASSEN Soeren EUSKIRCHEN Philipp

  Article in Periodical

  NATURE CANCER, year: 2025, volume: 6, edition: 7, DOI

• Detection of H3F3A K27M or BRAF V600E in liquid biopsies of brain tumor patients as diagnostic and monitoring biomarker: impact of tumor localization and sampling method

  MADLENER Sibylle STEPIEN Natalia SENFTER Daniel MAYR Lisa LAEMMERER Anna HEDRICH Cora BAUMGARTNER Alicia LOETSCH-GOJO Daniela ŠTĚRBA Jaroslav POKORNÁ Petra KIESEL Barbara WIDHALM Georg ECKERT Franziska PREUSSER Matthias ROESSLER Karl AZIZI Amedeo PEYRL Andreas CZECH Thomas HABERLER Christine SLAVC Irene KASPRIAN Gregor DORFER Christian FURTNER Julia GOJO Johannes

  Article in Periodical

  Acta Neuropathologica, year: 2025, volume: 149, edition: 1, DOI

• Effective targeting of PDGFRA-altered high-grade glioma with avapritinib

  MAYR Lisa NEYAZI Sina SCHWARK Kallen TRISSAL Maria BECK Alexander LABELLE Jenna EDER Sebastian K WEILER-WICHTL Liesa MARQUES Joana G DE BIAGI-JUNIOR Carlos A O COSTANZA Lo Cascio CHAPMAN Owen SRIDHAR Sunita KENKRE Rishaan DUTTA Aditi WANG Shanqing WANG Jessica HACK Olivia NASCIMENTO Andrezza NGUYEN Cuong M CASTELLANI Sophia ROZOWSKY Jacob S GROVES Andrew PANDITHARATNA Eshini CRUZEIRO Gustavo Alencastro Veiga HAASE Rebecca D TABATABAI Kuscha MADLENER Sibylle WADDEN Jack ADAM Tiffany KONG Seongbae MICLEA Madeline PATEL Tirth BRUCKNER Katharina SENFTER Daniel LAEMMERER Anna SUPKO Jeffrey GUNTNER Armin S PÁLOVÁ Hana NERADIL Jakub STEPIEN Natalia LOETSCH-GOJO Daniela BERGER Walter LEISS Ulrike ROSENMAYR Verena DORFER Christian DIECKMANN Karin PEYRL Andreas AZIZI Amedeo A BAUMGARTNER Alicia SLABÝ Ondřej POKORNÁ Petra CLARK Louise M NGUYEN Quang-De WAKIMOTO Hiroaki DUBOIS Frank GREENWALD Noah F BANDOPADHAYAY Pratiti BEROUKHIM Rameen CAMERON Amy LIGON Keith KRAMM Christof BRONSEMA Annika BAILEY Simon STUCKLIN Ana Guerreiro MUELLER Sabine SKRYPEK Mary MARTINEZ Nina BOWERS Daniel C JONES David T W JONES Chris JAEGER Natalie STERBA Jaroslav MUELLAUER Leonhard HABERLER Christine KUMAR-SINHA Chandan CHINNAIYAN Arul MODY Rajen CHAVEZ Lukas FURTNER Julia KOSCHMANN Carl GOJO Johannes FILBIN Mariella G

  Article in Periodical

  Cancer Cell, year: 2025, volume: 43, edition: 4, DOI

• Genomic complexity and evolution of high-grade serous ovarian cancer treated with platinum-based chemotherapy: advancing precision oncology beyond BRCA1/BRCA2

  POKORNÁ Petra ORLÍČKOVÁ Jana MACHÁČKOVÁ Táňa HAUSNEROVÁ Jitka EHRLICHOVÁ Lucie JUGAS Robin HLOUŠKOVÁ Eliška HOMOLOVÁ Alena VILMANOVÁ Sára BOHOŠOVÁ Júlia SOUČKOVÁ Kamila SVOBODA Marek WEINBERGER Vít SLABÝ Ondřej BEDNAŘÍKOVÁ Markéta

  Article in Periodical

  JOURNAL OF OVARIAN RESEARCH, year: 2025, volume: 19, edition: 1, DOI

• Individualized therapeutic approaches for relapsed and refractory pediatric ependymomas: a single institution experience.

  TINKA Pavel POKORNÁ Petra KÝR Michal PAVELKA Zdeněk VEJMĚLKOVÁ Klára PÁLOVÁ Hana NERADIL Jakub JEŽOVÁ Marta SLABÝ Ondřej ŠTĚRBA Jaroslav

  Article in Periodical

  JOURNAL OF NEURO-ONCOLOGY, year: 2025, DOI

• NTRK2 Fusion-Driven Neuroblastoma Treated With and Individualized Targeted Therapy Approach: A Case Report

  ŠTĚRBA Martin POKORNÁ Petra KÝR Michal MERTA Tomáš JENDRIŠÁKOVÁ Kateřina KOZÁKOVÁ Šárka SLABÝ Ondřej MÚDRY Peter ŠTĚRBA Jaroslav

  Article in Periodical

  Pediatric Hematology Oncology Journal, year: 2025, volume: 10, edition: 4, DOI

• Results Of Tumor Profiling Using Next-Generation Sequencing In The Real World Cohorts Of Patients With Platinum-Resistant And Platinum-Sensitive High-Grade Serous Ovarian Cancer #439

  BEDNAŘÍKOVÁ Markéta POKORNÁ Petra HAUSNEROVÁ Jitka ORLÍČKOVÁ Jana BOHOŠOVÁ Júlia MACHÁČKOVÁ Táňa JUGAS Robin EHRLICHOVÁ Lucie FELSINGER Michal MINÁŘ Luboš SLABÝ Ondřej WEINBERGER Vít

  Conference abstract

  Year: 2025, type: Conference abstract

• SMARCA4-deficient dedifferentiated ovarian carcinoma with rapid progression during adjuvant platinum-based chemotherapy: a case report and implications for molecular-driven treatment strategies

  BEDNAŘÍKOVÁ Markéta HAUSNEROVÁ Jitka POKORNÁ Petra FELSINGER Michal RICHTER Svatopluk EHRLICHOVÁ Lucie ORLÍČKOVÁ Jana MINÁŘ Luboš SLABÝ Ondřej WEINBERGER Vít

  Article in Periodical

  THERAPEUTIC ADVANCES IN MEDICAL ONCOLOGY, year: 2025, volume: 17, edition: October 2025, DOI

2024

• A computational workflow for analysis of missense mutations in precision oncology

  KHAN Rayyan Tariq POKORNÁ Petra DVORSKÝ Jan BORKO Simeon AREFIEV Ihor PLANAS IGLESIAS Joan DOBIÁŠ Adam RANGEL PAMPLONA PIZARRO PINTO José Gaspar SZOTKOWSKÁ Veronika ŠTĚRBA Jaroslav SLABÝ Ondřej DAMBORSKÝ Jiří MAZURENKO Stanislav BEDNÁŘ David

  Article in Periodical

  JOURNAL OF CHEMINFORMATICS, year: 2024, volume: 16, edition: 1, DOI

• Analysis of mutations in precision oncology using the automated, accurate, and user-friendly web tool PredictONCO

  KHAN Rayyan Tariq POKORNÁ Petra DVORSKÝ Jan BORKO Simeon DOBIÁŠ Adam PLANAS IGLESIAS Joan MAZURENKO Stanislav AREFIEV Ihor RANGEL PAMPLONA PIZARRO PINTO José Gaspar SZOTKOWSKÁ Veronika ŠTĚRBA Jaroslav DAMBORSKÝ Jiří SLABÝ Ondřej BEDNÁŘ David

  Article in Periodical

  Computational and Structural Biotechnology Journal, year: 2024, volume: 24, edition: December 2024, DOI