doc. Mgr. Lukáš Trantírek, Ph.D.

Curriculum Vitae

Person-Related Identification Information

• Mgr. Lukas Trantirek, Ph.D. Born: 4. 8. 1975 Moravska Trebova, Czech Republic

Department

• Department of Chemistry Utrecht University Padualaan 8 3584 CH Utrecht The Netherlands

Employment - Position

• project leader/ Univ. docent

Education and Academic Qualifications

• B.Sc. – Organic Chemistry, Department of Organic Chemistry, Masaryk University, Czech Republic (September/1993-June/1996) M.Sc. – Organic Chemistry, Department of Organic Chemistry, Masaryk University, Czech Republic (September/1996-June/1998). Supervisor: Prof. Dr. J. Koca Ph.D. – organic chemistry, field of specialization: Molecular Engineering National Centre for Biomolecular Research, Masaryk University, Czech Republic (September/1998-December/2001) Supervisor: Prof. Dr. V. Sklenar

Employment

• • post-doctoral research fellow, Department of Chemistry and Biochemistry & Molecular Biology Institute, University of California Los Angeles, USA (January/2002-December/2003).Supervisor: Prof. Dr. J. Feigon • post-doctoral research fellow, Institute of Chemistry, Johannes Kepler University in Linz, Austria , (April/2004-April/2005). Supervisor: Prof. Dr. N. Muller • researcher/assistant professor, Department of Molecular Biology and Biochemistry, University of South Bohemia, Ceske Budejovice, Czech Republic (January/2004 – February/2009) • researcher/Univ. docent - Department of Chemistry, Utrecht University, Utrecht, The Netherlands, (March/2009-present)

Teaching Activities

• a) Organic Chemistry (seminar) & Organic Chemistry (practical course) (2004,2005,2006,2007,2008), course coordinator & lector University of South Bohemia, Czech Republic b) Bioinformatics (lecture) & Bioinformatics (seminar) (2005, 2006, 2007), course coordinator & lector University of South Bohemia, Czech Republic c) Chemistry of the Cell (seminar) (2009), lector Utrecht University, The Netherlands d) Structural Biology, Biophysics (seminar, lecture, practical training) (2010, 2011), lector Utrecht University, The Netherlands e) Structural Biology: biophysical aspects (lecture) (2011) visiting professor Masaryk University, Czech Republic f) In a period of 2004-present, I have supervised 2 post-doc, 3 Ph.D. students, 4 M.Sc. (2 year research projects) students, 4 B.Sc. (one year research project) students.

Scientific and Research Activities

• Structural Biology, Organic Stereochemistry, Chemical signal transduction, Biopolymers, Nanotechnologies

Internship

• • Research stay, Department of Biophysical Chemistry II, prof. M. Akke, Lund University, Sweden (January/2001) • Department of Chemistry and Biochemistry & Molecular Biology Institute, University of California Los Angeles, USA (January/2002-December/2003) • Institute of Chemistry, Johannes Kepler University in Linz, Austria , (April/2004-April/2005). • Department of Physical Biochemistry, Max Planck Institute of Molecular Physiology, Dortmund, Germany (April/2008-September/2008) • Department of Chemistry, Utrecht University, Utrecht, The Netherlands, (March/2009-present)

Major Publications

• TRANTÍREK, Lukáš, Richard ŠTEFL, Michalea VORLÍČKOVÁ, Jaroslav KOČA, Vladimír SKLENÁŘ a Jaroslav KYPR. An A-type Double Helix of DNA Having B-type Puckering of the Deoxyribose Rings. Journal of Molecular Biology. USA: Academic Press, roč. 297, č. 4, s. 907-922. ISSN 0022-2836. 2000. info
• TRANTÍREK, Lukáš, Milan URBÁŠEK, Richard ŠTEFL, Juli FEIGON a Vladimír SKLENÁŘ. A Method for Direct Determination of Helical Parameters in Nucleic Acids Using Residual Dipolar Couplings. Journal of the American Chemical Society. Washington, D.C.: American Chemical Society, roč. 122, č. 42, s. 10454-10455. ISSN 0002-7863. 2000. info
• DAMBORSKÝ, Jiří, Martina DAMBORSKÁ, Svatopluk ŠTÍPEK, Andrea JESENSKÁ, Lukáš TRANTÍREK a Vladimír SKLENÁŘ. Effect of the carbon source on assessment of degrading bacteria with the spread-plating technique during in situ bioremediation. Folia Microbiologica. roč. 45, č. 1, s. 35-40. ISSN 0015-5632. 2000. URL info

2011/09/11