Publication details

Competition among weak C–H⋯O/S/H interactions in the crystal structure of {(C2H5O)2P(S)}2N2C4H8 bis(thiophosphoramide): experimental/computational studies

Authors

KHORRAMAKI Maliheh POURAYOUBI Mehrdad DARUGAR Vahidreza VAKILI Mohammad NECAS Marek AKBARI Mahmood MAAZA Malik

Year of publication 2025
Type Article in Periodical
Magazine / Source RSC Advances
MU Faculty or unit

Faculty of Science

Citation
web
Doi https://doi.org/10.1039/d5ra01306b
Keywords MOLECULAR DOCKING; LONDON DISPERSION; MODEL ENERGIES; CRYSTALEXPLORER; INHIBITOR; COMPLEXES; PROGRAM; QSAR
Description Supramolecular assembly driven by weak C–H?S[double bond, length as m-dash]P/O and CH?HC contacts was studied in a new bis(thiophosphoramide) structure, {(C2H5O)2P(S)}2N2C4H8, using X-ray crystallography and DFT computational methods. Combined QTAIM/noncovalent interaction (NCI) and natural bond orbital (NBO) analyses were used to gain deeper insights into the nature, energy and strengths of these contacts. The C–H?O hydrogen bond was found to be the strongest interaction, followed by two H?H and then H?S contacts. Crystal lattice energy calculations were performed, and the components contributing to the intermolecular interactions were investigated and discussed (electrostatic, polarization, dispersion and repulsion). The dispersion forces were found to be the most prominent in the network energy. The relative contributions of the intermolecular contacts were visualized by Hirshfeld surfaces and two-dimensional fingerprint diagrams. Some topics related to geometry and conformation were also studied.

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