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Bacteriome-based oral dysbiosis index in patients with oral squamous cell carcinoma

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SZÁRAZ Dávid BÖHM Jan MACHÁČEK Ctirad ŠKOVRANOVÁ Gabriela GACHOVÁ Daniela RŮŽIČKA Filip DANĚK Zdeněk GHEIT Tarik ZAVADIL Jiri BOŘILOVÁ LINHARTOVÁ Petra

Rok publikování 2026
Druh Článek v odborném periodiku
Časopis / Zdroj JOURNAL OF ORAL MICROBIOLOGY
Fakulta / Pracoviště MU

Přírodovědecká fakulta

Citace
www https://www.tandfonline.com/doi/full/10.1080/20002297.2026.2668149
Doi https://doi.org/10.1080/20002297.2026.2668149
Klíčová slova Mouth neoplasms; microbiota; Fusobacterium; dysbiosis; Candida; cytomegalovirus; EBV; metagenomics; dental plaque; tongue
Přiložené soubory
Popis Background: Oral dysbiosis plays an important role in the pathogenesis of oral squamous cell carcinoma (OSCC). Our study aimed to perform a pairwise comparison of the oral microbiota, especially the bacteriome, from OSCC tumoral surface vs other oral samples and evaluate the association of a novel bacteriome-based Oral Dysbiosis Index (bbODI) with the OSCC surface. Materials and methods: This pilot observational study used 84 patient-matched samples from the OSCC tumoral surface (swabs and biopsies), healthy oral mucosa (tongue and buccal swabs), and supragingival dental plaque swabs. Bacteriomes were analyzed by 16S rRNA amplicon sequencing. The presence of microscopic fungi and selected viruses was also evaluated. Results: The relative abundance of the genus Fusobacterium, the ratio of the relative abundances of gram-negative to gram-positive bacterial genera, and the bbODI on the tumour surface significantly differed from patient-matched healthy oral mucosa (both buccal and tongue swabs) and supragingival dental plaque samples. Oral candidosis was found in 25% of patients; all patients were negative for cytomegalovirus and Epstein-Barr virus. Conclusions: Certain characteristics of the bacteriome composition of the OSCC surface differ from patient-matched samples of healthy oral mucosa and supragingival dental plaque. The proposed bbODI appears to be a promising non-invasive tool for the identification of bacteriome disruption on the OSCC surface.
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