CICADA: Parallelization and Related Problems

• Authors: KOSINA Aleš; KŘÍŽ Zdeněk; KOČA Jaroslav
• Year of publication: 2005
• Type: Article in Proceedings
• Conference: Workshop on Modeling Interactions in Biomolecules II
• MU Faculty or unit: Faculty of Science
• Field: Biochemistry
• Keywords: Single Coordinate Driving; Parallelization; Conformational Analysis; result verification
• Description: CICADA programme is based on SCD (Single Coordinate Driving) approach and is used for a comformational analysis and molecular docing of small and middle sized molecules. CICADA programme was parallelized in Master-Slave approach. The programme were extensively tested for the correctness on different computer environment and is showen result independece on number of CPU and eviroment.

Related projects

• Proteins in metabolism and interaction of organisms with the environment
• Biomolecular Structure-function Relationships and their role in the Metabolism