Publication details

Toward protein NMR at physiological concentrations by hyperpolarized water-Finding and mapping uncharted conformational spaces

Authors

EPASTO Ludovica M. CHE Kateryna KOZAK Fanny SELIMOVIC Albina KADEŘÁVEK Pavel KURZBACH Dennis

Year of publication 2022
Type Article in Periodical
Magazine / Source Science advances
MU Faculty or unit

Central European Institute of Technology

Citation
Web https://www.science.org/doi/10.1126/sciadv.abq5179
Doi http://dx.doi.org/10.1126/sciadv.abq5179
Keywords DYNAMIC NUCLEAR-POLARIZATIONINTRINSICALLY DISORDERED PROTEINSTRANSCRIPTION FACTORSDNAMAXMYCPREDICTIONMECHANISMINSIGHTSCOGNATE
Description Nuclear magnetic resonance (NMR) spectroscopy is a key method for determining the structural dynamics of proteins in their native solution state. However, the low sensitivity of NMR typically necessitates nonphysiologically high sample concentrations, which often limit the relevance of the recorded data. We show how to use hyperpolarized water by dissolution dynamic nuclear polarization (DDNP) to acquire protein spectra at concentrations of 1.M within seconds and with a high signal-to-noise ratio. The importance of approaching physiological concentrations is demonstrated for the vital MYC-associated factor X, which we show to switch conformations when diluted. While in vitro conditions lead to a population of the well-documented dimer, concentrations lowered by more than two orders of magnitude entail dimer dissociation and formation of a globularly folded monomer. We identified this structure by integrating DDNP with computational techniques to overcome the often-encountered constraint of DDNP of limited structural information provided by the typically detected one-dimensional spectra.

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