Publication details

Rgtsp: a generalized top scoring pairs package for class prediction



Year of publication 2011
Type Article in Periodical
Magazine / Source Bioinformatics
MU Faculty or unit

Faculty of Medicine

Field Other medical specializations
Keywords top scoring pair TSP class prediction
Description A top scoring pair (TSP) classifier consists of a pair of variables whose relative ordering can be used for accurately predicting the class label of a sample. This classification rule has the advantage of being easily interpretable and more robust against technical variations in data, as those due to different microarray platforms. Here we describe a parallel implementation of this classifier which significantly reduces the training time, and a number of extensions, including a multi-class approach, which has the potential of improving the classification performance.

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