Publication details

Increased protein backbone conformational entropy upon hydrophobic ligand binding

Authors

ŽÍDEK Lukáš NOVOTNY Milos STONE Martin J

Year of publication 1999
Type Article in Periodical
Magazine / Source Nature Structural Biology
MU Faculty or unit

Faculty of Science

Citation
Keywords N-15 NMR RELAXATION; NUCLEAR-MAGNETIC-RESONANCE; MODEL-FREE APPROACH; ORDER PARAMETERS; DYNAMICS; SPECTROSCOPY; RECOGNITION; ENERGY; DOMAIN; ENZYME
Description For complexes between proteins and very small hydrophobic ligands, hydrophobic effects alone map be insufficient to outweigh the unfavorable entropic terms resulting from bimolecular association. NMR relaxation experiments indicate that the backbone flexibility of mouse major urinary protein increases upon binding the hydrophobic mouse pheromone 2-sec-butyl-4,5-dihydrothiazole. The associated increase in backbone conformational entropy of the protein appears to make a substantial contribution toward stabilization of the protein-pheromone complex. This term is likely comparable in magnitude to other important free energy contributions to binding and map represent a general mechanism to promote binding of very small ligands to macromolecules.

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