Publication details

Effective Inclusion of Electronic Polarization Improves the Description of Electrostatic Interactions: The prosECCo75 Biomolecular Force Field

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Authors

NENCINI Ricky TEMPRA Carmelo BIRIUKOV Denys RIOPEDRE-FERNANDEZ Miguel CHAMORRO Victor Cruces POLÁK Jakub MASON Philip E. ONDO Daniel HEYDA Jan OLLILA O. H. Samuli JUNGWIRTH Pavel JAVANAINEN Matti MARTINEZ-SEARA Hector

Year of publication 2024
Type Article in Periodical
Magazine / Source Journal of Chemical Theory and Computation
MU Faculty or unit

Central European Institute of Technology

Citation
web https://pubs.acs.org/doi/10.1021/acs.jctc.4c00743
Doi https://doi.org/10.1021/acs.jctc.4c00743
Keywords molecular dynamics; force field; electrostatic interactions; scaled charges; biomolecules
Description prosECCo75 is an optimized force field effectively incorporating electronic polarization via charge scaling. It aims to enhance the accuracy of nominally nonpolarizable molecular dynamics (MD) simulations for interactions in biologically relevant systems involving water, ions, proteins, lipids, and saccharides. Recognizing the inherent limitations of nonpolarizable force fields in precisely modeling electrostatic interactions essential for various biological processes, we mitigate these shortcomings by accounting for electronic polarizability in a physical rigorous mean-field way that does not add to computational costs. With this scaling of (both integer and partial) charges within the CHARMM36 framework, prosECCo75 addresses overbinding artifacts. This improves agreement with experimental ion binding data across a broad spectrum of systems - lipid membranes, proteins (including peptides and amino acids), and saccharides - without compromising their biomolecular structures. prosECCo75 thus emerges as a computationally efficient tool providing enhanced accuracy and broader applicability in simulating the complex interplay of interactions between ions and biomolecules, pivotal for improving our understanding of many biological processes.
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