Ing. RNDr. Martin Marek, Ph.D., MBA

2025

• Automated Engineering Protein Dynamics via Loop Grafting: Improving <i>Renilla</i> Luciferase Catalysis

  PLANAS IGLESIAS Joan MAJEROVÁ Marika PLUSKAL Daniel VAŠINA Michal DAMBORSKÝ Jiří PROKOP Zbyněk MAREK Martin BEDNÁŘ David

  Article in Periodical

  ACS Catalysis, year: 2025, volume: 15, edition: 4, DOI

• Engineering Dehalogenase Enzymes Using Variational Autoencoder-Generated Latent Spaces and Microfluidics

  KOHOUT Pavel VAŠINA Michal MAJEROVÁ Marika NOVÁKOVÁ Veronika DAMBORSKÝ Jiří BEDNÁŘ David MAREK Martin PROKOP Zbyněk MAZURENKO Stanislav

  Article in Periodical

  JACS AU, year: 2025, volume: 5, edition: 2, DOI

2024

• Identification of new endocrine disruptive transthyretin ligands in polluted waters using pull-down assay coupled to non-target mass spectrometry

  MIKUŠOVÁ Petra TOUŠOVÁ Zuzana SEHNAL Luděk KUTA Jan GRABICOVA K. FEDOROVA G. MAREK Martin GRABIC R. HILSCHEROVÁ Klára

  Article in Periodical

  Journal of Hazardous Materials, year: 2024, volume: 471, edition: June 2024, DOI

• Nová duální dehalogenáza-luciferáza z hvězdice křehké Amphiura filiformis

  MAJEROVÁ Marika VAŠINA Michal PLUSKAL Daniel SEDLÁČKOVÁ Karolina PROKOP Zbyněk DAMBORSKÝ Jiří MAREK Martin

  Outcomes put into operation (prototype, working sample)

  Year: 2024

• Nová vysoce aktivní luciferáza z hvězdice křehké Amphiura filiformis

  MAJEROVÁ Marika VAŠINA Michal PLUSKAL Daniel SEDLÁČKOVÁ Karolina PROKOP Zbyněk DAMBORSKÝ Jiří MAREK Martin

  Outcomes put into operation (prototype, working sample)

  Year: 2024

• Structural analysis of the stable form of fibroblast growth factor 2 - FGF2-STAB

  DE LA BOURDONNAYE Gabin MAREK Martin GHAZALOVÁ Tereza DAMBORSKÝ Jiří PACHL Petr BRYNDA Jiri ŠTĚPÁNKOVÁ Veronika CHALOUPKOVÁ Radka

  Article in Periodical

  Journal of Structural Biology: X, year: 2024, volume: 10, edition: December 2024, DOI

• Ultrastructural description of surface receptors in the bioluminescent brittle star Amphiura filiformis (Müller, 1776)

  BAYAERT Wendy Shirley DUCHATELET Laurent SILLANPAEAE Kirsikka DUPONT Sam MAREK Martin FLAMMANG Patrick DELROISSE Jerome

  Article in Periodical

  CAHIERS DE BIOLOGIE MARINE, year: 2024, volume: 65, edition: 4, DOI

2023

• Advancing Enzyme's Stability and Catalytic Efficiency through Synergy of Force-Field Calculations, Evolutionary Analysis, and Machine Learning

  KUNKA Antonín MARQUES Sérgio Manuel HAVLÁSEK Martin VAŠINA Michal VELÁTOVÁ Nikola CENGELOVÁ Lucia KOVÁŘ David DAMBORSKÝ Jiří MAREK Martin BEDNÁŘ David PROKOP Zbyněk

  Article in Periodical

  ACS Catalysis, year: 2023, volume: 13, edition: 19, DOI

• Atypical homodimerization revealed by the structure of the (S)-enantioselective haloalkane dehalogenase DmmarA from Mycobacterium marinum

  ŠNAJDAROVÁ Karolína MARQUES Sérgio Manuel DAMBORSKÝ Jiří BEDNÁŘ David MAREK Martin

  Article in Periodical

  Acta Crystallographica Section D: Structural Biology, year: 2023, volume: 79, edition: November, DOI

• Catalytic mechanism for Renilla-type luciferases

  SMITH Andrea TOUL Martin PLUSKAL Daniel BAATALLAH Racha GAGNOT Glwadys RANGEL PAMPLONA PIZARRO PINTO José Gaspar SANTANA Vinicius T. T. STUCHLÁ Markéta NEUGEBAUER Petr CHAIYEN Pimchai DAMBORSKÝ Jiří BEDNÁŘ David JANIN Yves L. L. PROKOP Zbyněk MAREK Martin

  Article in Periodical

  Nature Catalysis, year: 2023, volume: 6, edition: 1, DOI