RNDr. Matej Antol, Ph.D.

2024

• AlphaFind: Discover structure similarity across the entire known proteome

  PROCHÁZKA David SLANINÁKOVÁ Terézia OĽHA Jaroslav ROŠINEC Adrián GREŠOVÁ Katarína JÁNOŠOVÁ Miriama ČILLÍK Jakub PORUBSKÁ Jana SVOBODOVÁ Radka DOHNAL Vlastislav ANTOL Matej

  Research report

  Year: 2024

• AlphaFind: Discover structure similarity across the entire known proteome – data and model

  NOVOTNÁ Lucie SLANINÁKOVÁ Terézia PROCHÁZKA David HEJTMÁNEK Lukáš GREŠOVÁ Katarína OĽHA Jaroslav DOHNAL Vlastislav ROŠINEC Adrián ANTOL Matej

  Specialized database

  Year: 2024, type: Specialized database

• AlphaFind: discover structure similarity across the proteome in AlphaFold DB

  PROCHÁZKA David SLANINÁKOVÁ Terézia OĽHA Jaroslav ROŠINEC Adrián GREŠOVÁ Katarína JÁNOŠOVÁ Miriama ČILLÍK Jakub PORUBSKÁ Jana SVOBODOVÁ Radka DOHNAL Vlastislav ANTOL Matej

  Article in Periodical

  Nucleic acids research, year: 2024, volume: 52, edition: W1, DOI

• Beyond Metadata: Leveraging Similarity Search in Molecular Dynamics Data

  ROŠINEC Adrián PAVLÍK Tomáš SLANINÁKOVÁ Terézia KŘENEK Aleš ŠPRINGEROVÁ Pavlína ANTOL Matej SVOBODOVÁ Radka

  Conference abstract

  Year: 2024, type: Conference abstract

• Cells, biomaterials, infrastructure; and the value of the data

  CAPANDOVÁ Michaela SEDLÁKOVÁ Veronika VORÁČ Zbyněk KOTASOVÁ Hana DUMKOVÁ Jana MORÁŇ Lukáš JAROŠ Josef ANTOL Matej BOHAČIAKOVÁ Dáša HAMPL Aleš

  Conference abstract

  Year: 2024, type: Conference abstract

• EOSC CZ: Towards the development of Czech national ecosystem for FAIR research data

  ANTOL Matej MAREK Jiří CAPANDOVÁ Michaela JURÁČEK Jaroslav MATYSKA Luděk

  Research report

  Year: 2024

• Fast, structure-based searching in a large-scale protein data repository

  SLANINÁKOVÁ Terézia GREŠOVÁ Katarína PROCHÁZKA David SPIŠAKOVÁ Viktória ROŠINEC Adrián ČILLÍK Jakub ŠPRINGEROVÁ Pavlína KŘENEK Aleš DOHNAL Vlastislav SVOBODOVÁ Radka ANTOL Matej

  Conference abstract

  Year: 2024, type: Conference abstract

• GraSR: Protein structural embeddings of AlphaFold DB

  NOVOTNÁ Lucie SLANINÁKOVÁ Terézia PROCHÁZKA David HEJTMÁNEK Lukáš ROŠINEC Adrián OĽHA Jaroslav GREŠOVÁ Katarína DOHNAL Vlastislav ANTOL Matej

  Research and development projects

  Year: 2024, type: Research and development projects

• LMI-10: Protein structural embeddings of AlphaFold DB

  NOVOTNÁ Lucie SLANINÁKOVÁ Terézia PROCHÁZKA David HEJTMÁNEK Lukáš ROŠINEC Adrián OĽHA Jaroslav GREŠOVÁ Katarína DOHNAL Vlastislav ANTOL Matej

  Research and development projects

  Year: 2024, type: Research and development projects

• LMI-30: Protein structural embeddings of AlphaFold DB

  NOVOTNÁ Lucie SLANINÁKOVÁ Terézia PROCHÁZKA David HEJTMÁNEK Lukáš ROŠINEC Adrián OĽHA Jaroslav GREŠOVÁ Katarína DOHNAL Vlastislav ANTOL Matej

  Research and development projects

  Year: 2024, type: Research and development projects