Publication details

pqsfinder: identification of potential quadruplex forming sequences

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Authors

HON Jiří LEXA Matej MARTÍNEK Tomáš ZENDULKA Jaroslav

Year of publication 2017
MU Faculty or unit

Faculty of Informatics

Web pqsfinder: Identification of potential quadruplex forming sequences
Description The main functionality of the this package is to detect DNA sequence patterns that are likely to fold into an intramolecular G-quadruplex (G4). Unlike many other approaches, this package is able to detect sequences responsible for G4s folded from imperfect G-runs containing bulges or mismatches and as such is more sensitive than competing algorithms.
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