Stanislav Mazurenko, PhD

2026

• FireProtDB 2.0: large-scale manually curated database of the protein stability data

  MUSIL Miloš BORKO Simeon PLANAS IGLESIAS Joan LACKO Dávid ROSINSKA Monika KABOUREK Petr MARTINS Ligia O. TATARUCH Mateusz DAMBORSKÝ Jiří MAZURENKO Stanislav BEDNÁŘ David

  Article in Periodical

  NUCLEIC ACIDS RESEARCH, year: 2026, volume: 54, edition: D1, DOI

2025

• Anticipating protein evolution with successor sequence predictor

  KHAN Rayyan Tariq KOHOUT Pavel MUSIL Miloš ROSINSKÁ Monika DAMBORSKÝ Jiří MAZURENKO Stanislav BEDNÁŘ David

  Article in Periodical

  Journal of Cheminformatics, year: 2025, volume: 17, edition: 1, DOI

• Assessing the impact of His-tags on activity and stability of staphylokinase variants

  STULAJTEROVA Monika AMBRO Lubos SEDLAKOVA Dagmar NEMERGUT Michal KOHOUT Pavel MAZURENKO Stanislav VARHAC Rastislav STRUNGA Alan TOUL Martin PROKOP Zbyněk DAMBORSKÝ Jiří TOMKOVA Maria SEDLÁK Erik

  Article in Periodical

  International Journal of Biological Macromolecules, year: 2025, volume: 328, edition: November 2025, DOI

• Engineering Dehalogenase Enzymes Using Variational Autoencoder-Generated Latent Spaces and Microfluidics

  KOHOUT Pavel VAŠINA Michal MAJEROVÁ Marika NOVÁKOVÁ Veronika DAMBORSKÝ Jiří BEDNÁŘ David MAREK Martin PROKOP Zbyněk MAZURENKO Stanislav

  Article in Periodical

  JACS Au, year: 2025, volume: 5, edition: 2, DOI

• Machine learning applied to biocatalysis research

  BRATOVIC Majda BULLER Rebecca MAZURENKO Stanislav YANG Yang

  Article in Periodical (without peer review)

  Year: 2025, type: Article in Periodical (without peer review)

• Quantum computing for faster enzyme discovery and engineering

  DAMBORSKÝ Jiří KOUBA Petr SIVIC Josef VAŠINA Michal BEDNÁŘ David MAZURENKO Stanislav

  Article in Periodical

  Nature Catalysis, year: 2025, volume: 8, edition: 9, DOI

• Response to Letter to Editor by A. Derbalah et al.: the role of automation in enhancing reproducibility and interoperability of PBPK models

  DOMINGUEZ ROMERO Elena MAZURENKO Stanislav SCHERINGER Martin DOS SANTOS Vitor A. P. Martins EVELO Chris T. ANTON Mihail HANCOCK John M. ZUPANIC Anze SUAREZ-DIEZ Maria

  Article in Periodical

  BRIEFINGS IN BIOINFORMATICS, year: 2025, volume: 26, edition: 1, DOI

2024

• A computational workflow for analysis of missense mutations in precision oncology

  KHAN Rayyan Tariq POKORNÁ Petra DVORSKÝ Jan BORKO Simeon AREFIEV Ihor PLANAS IGLESIAS Joan DOBIÁŠ Adam RANGEL PAMPLONA PIZARRO PINTO José Gaspar SZOTKOWSKÁ Veronika ŠTĚRBA Jaroslav SLABÝ Ondřej DAMBORSKÝ Jiří MAZURENKO Stanislav BEDNÁŘ David

  Article in Periodical

  JOURNAL OF CHEMINFORMATICS, year: 2024, volume: 16, edition: 1, DOI

• Analysis of mutations in precision oncology using the automated, accurate, and user-friendly web tool PredictONCO

  KHAN Rayyan Tariq POKORNÁ Petra DVORSKÝ Jan BORKO Simeon DOBIÁŠ Adam PLANAS IGLESIAS Joan MAZURENKO Stanislav AREFIEV Ihor RANGEL PAMPLONA PIZARRO PINTO José Gaspar SZOTKOWSKÁ Veronika ŠTĚRBA Jaroslav DAMBORSKÝ Jiří SLABÝ Ondřej BEDNÁŘ David

  Article in Periodical

  Computational and Structural Biotechnology Journal, year: 2024, volume: 24, edition: December 2024, DOI

• BenchStab: A tool for automated querying of web-based stability predictors

  VELECKÝ Jan BEREZNÝ Matej MUSIL Miloš DAMBORSKÝ Jiří BEDNÁŘ David MAZURENKO Stanislav

  Article in Periodical

  BIOINFORMATICS, year: 2024, volume: 40, edition: 9, DOI