Informace o publikaci
OverProt: secondary structure consensus for protein families
| Autoři | |
|---|---|
| Rok publikování | 2022 |
| Druh | Článek v odborném periodiku |
| Časopis / Zdroj | Bioinformatics |
| Fakulta / Pracoviště MU | |
| Citace | |
| www | https://academic.oup.com/bioinformatics/article/38/14/3648/6604272 |
| Doi | http://dx.doi.org/10.1093/bioinformatics/btac384 |
| Klíčová slova | protein family; OverProt |
| Popis | Every protein family has a set of characteristic secondary structures. However, due to individual variations, a single structure is not enough to represent the whole family. OverProt can create a secondary structure consensus, showing the general fold of the family as well as its variation. Our server provides precomputed results for all CATH superfamilies and user-defined computations, visualized by an interactive viewer, which shows the secondary structure element type, length, frequency of occurrence, spatial variability and beta-connectivity. |
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