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Biodiversity: a Principle of Life in the Hands of Computational Science

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DUŠEK Ladislav JARKOVSKÝ Jiří KOPTÍKOVÁ Jana NÉMETHOVÁ Danka KUBÍK Vratislav RÁČEK Jaroslav HŘEBÍČEK Jiří

Rok publikování 2007
Druh Článek ve sborníku
Konference Proceedings of the 3rd Internationl Summer School on Computational Biology
Fakulta / Pracoviště MU

Přírodovědecká fakulta

Citace
Obor Ekologie - společenstva
Klíčová slova biodiversity; diversity indices; species-abundance models; niche-oriented models
Popis This paper has been prepared to provide a brief educational overview of biodiversity data as a subject of different types of studies. The biodiversity is defined in all levels of organization of biological systems, from molecular and genomic level to ecosystem scale. A special attention is given to the methodology of different types of analyses, including the widely-used modeling of species-abundance relationships. The analysis of biodiversity is widely available in many software packages and hundreds of measures can be used; however, it must always be done with a very careful and correct interpretation. Several key numerical principles underlying large families of biodiversity measures are explained. These are so-called Shannons concept of biodiversity, principle of dominance, principle of evenness, species-abundance cumulative profiles and niche-oriented modeling. The paper concludes that the remarkable specifics of biodiversity data and biodiversity itself make this field extremely challenging for computational science, including computer-assisted simulations and modern data mining techniques.
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